RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 TRIM63Q969Q1 353 aa10.5□□□□□ -0.73
CTDNEP1-211ENST00000575783 SH3BGRL3Q9H299 93 aa10.5□□□□□ -0.73
CTDNEP1-211ENST00000575783 URGCP-MRPS24S4R325 110 aa10.5□□□□□ -0.73
CTDNEP1-211ENST00000575783 RBAKDNA6NC62 111 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAGE12JA6NER3 117 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 TYMSP04818 313 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAGE1Q13065 139 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAGE4Q13068 117 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAGE5Q13069 117 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 ODF1Q14990 250 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAGE13Q4V321 117 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 MIR17HGQ75NE6 70 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 PHYHIPLQ96FC7 376 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 ATP5SQ99766 215 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 OR51M1Q9H341 326 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 DPH3P1Q9H4G8 78 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
CTDNEP1-211ENST00000575783 FAM24AA6NFZ4 105 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 CIDEAO60543 219 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 FGF7P21781 194 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 C2orf50Q96LR7 162 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 SDF2L1Q9HCN8 221 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 FLVCR2Q9UPI3 526 aa10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 LSM5Q9Y4Y9 91 aaKnown RBP10.48□□□□□ -0.73
CTDNEP1-211ENST00000575783 MGST1P10620 155 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-211ENST00000575783 C14orf177Q52M58 125 aa10.47□□□□□ -0.73
CTDNEP1-211ENST00000575783 FXYD5Q96DB9 178 aa10.47□□□□□ -0.73
CTDNEP1-211ENST00000575783 LENEPQ9Y5L5 61 aa10.47□□□□□ -0.73
CTDNEP1-211ENST00000575783 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 A0A0D9SG52 128 aa10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 INPP1P49441 399 aa10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 FFAR4Q5NUL3 377 aa10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 ASB13Q8WXK3 278 aa10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-211ENST00000575783 A0A087WWC5 75 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 DIRC3C9JPN6 131 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 SEC11BP0C7V7 166 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 CYB561D1Q8N8Q1 229 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 CHAC2Q8WUX2 184 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 KCNS1Q96KK3 526 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
CTDNEP1-211ENST00000575783 F6UZH7 168 aa10.44□□□□□ -0.74
CTDNEP1-211ENST00000575783 PANO1I0J062 215 aa10.44□□□□□ -0.74
CTDNEP1-211ENST00000575783 S100A11P31949 105 aa10.44□□□□□ -0.74
CTDNEP1-211ENST00000575783 NIT1Q86X76 327 aa10.44□□□□□ -0.74
CTDNEP1-211ENST00000575783 CCSO14618 274 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 SMIM18P0DKX4 95 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 HSD17B11Q8NBQ5 300 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 DEDD2Q8WXF8 326 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 NPCDR1Q9BY65 106 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 Q9UF83 564 aa10.43□□□□□ -0.74
CTDNEP1-211ENST00000575783 A0A087WX48 190 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 FAM25EA8MYX2 175 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 OR7C2O60412 319 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 NDUFB6O95139 128 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 SULT1A1P50225 295 aa10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 SLIRPQ9GZT3 109 aaKnown RBP10.42□□□□□ -0.74
CTDNEP1-211ENST00000575783 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 HBG1P69891 147 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 HBG2P69892 147 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 ZNF506Q5JVG8 444 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 SPANXN2Q5MJ10 180 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 TMED6Q8WW62 240 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 DPH3Q96FX2 82 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 SAMD10Q9BYL1 202 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 NMES1Q9C002 83 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 TREM1Q9NP99 234 aa10.41□□□□□ -0.74
CTDNEP1-211ENST00000575783 IGSF23A1L1A6 192 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 USP17L23D6RBM5 183 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 ELOBQ15370 118 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 KCNIP4Q6PIL6 250 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 STX12Q86Y82 276 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 THAP6Q8TBB0 222 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 MITD1Q8WV92 249 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 TVP23CQ96ET8 276 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 BCL7BQ9BQE9 202 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 V9GYH0 126 aa10.4□□□□□ -0.74
CTDNEP1-211ENST00000575783 PRSS1P07477 247 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 PVALBP20472 110 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 UBE2L3P68036 154 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 Q0VG73 95 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 ATP6V1FQ16864 119 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 TMEM252Q8N6L7 170 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 C9orf163Q8N9P6 203 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 OR10G9Q8NGN4 311 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 C11orf1Q9H5F2 150 aa10.39□□□□□ -0.75
CTDNEP1-211ENST00000575783 FGF8P55075 233 aaPredicted RBP10.38□□□□□ -0.75
CTDNEP1-211ENST00000575783 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
CTDNEP1-211ENST00000575783 GOLT1AQ6ZVE7 132 aa10.38□□□□□ -0.75
CTDNEP1-211ENST00000575783 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms