RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 CSN3P07498 182 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 RNASE1P07998 156 aaKnown RBP5.13□□□□□ -1.59
SMG6-217ENST00000575338 CDKN1BP46527 198 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 TCTEX1D4Q5JR98 221 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 KHDC1LQ5JSQ8 128 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 CDPF1Q6NVV7 123 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 ZNF705AQ6ZN79 300 aaPredicted RBP5.13□□□□□ -1.59
SMG6-217ENST00000575338 SPATA12Q7Z6I5 190 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 DEFB125Q8N687 156 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 OR9G4Q8NGQ1 327 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 OR1N2Q8NGR9 330 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 MIEN1Q9BRT3 115 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 PRO1933Q9H354 126 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 DPH3P1Q9H4G8 78 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 YAE1D1Q9NRH1 226 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 UQCR10Q9UDW1 63 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 HECTD1Q9ULT8 2610 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 UTP20O75691 2785 aaKnown RBP5.12□□□□□ -1.59
SMG6-217ENST00000575338 TRGV11A0A075B6L2 103 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 TRAV9-2A0A087WT02 112 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 OR4C46A6NHA9 309 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 CYSRT1A8MQ03 144 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 PRSS47A8MTI9 375 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 SYS1-DBNDD2H3BUS1 97 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 H3BVH4 76 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 M0R381 172 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 ZNF688P0C7X2 276 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 RNASE4P34096 147 aaKnown RBP5.12□□□□□ -1.59
SMG6-217ENST00000575338 CTAG1AP78358 180 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 TDRG1Q3Y452 100 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 SPATA45Q537H7 98 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 Q6ZSV7 163 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 WFDC3Q8IUB2 231 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 KLHL30-AS1Q8NEE0 82 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 OR11H1Q8NG94 326 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 DUX5Q96PT3 197 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
SMG6-217ENST00000575338 C16orf95Q9H693 158 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 SIGLEC8Q9NYZ4 499 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 PAM16Q9Y3D7 125 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 LRRK2Q5S007 2527 aa5.12□□□□□ -1.59
SMG6-217ENST00000575338 LINC01546A6NGU7 62 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 ATP5LO75964 103 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 TNFRSF6BO95407 300 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 SRD5A1P18405 259 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 IFI27P40305 119 aaPredicted RBP5.11□□□□□ -1.59
SMG6-217ENST00000575338 ANXA2RQ3ZCQ2 193 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 ORMDL2Q53FV1 153 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 Q71RC1 249 aaPredicted RBP5.11□□□□□ -1.59
SMG6-217ENST00000575338 Q8N8P6 123 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 RNF185Q96GF1 192 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 URB1-AS1Q96HZ7 61 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 C20orf78Q9BR46 151 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 ST20Q9HBF5 79 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 SCRT2Q9NQ03 307 aa5.11□□□□□ -1.59
SMG6-217ENST00000575338 TSSC4Q9Y5U2 329 aaPredicted RBP5.11□□□□□ -1.59
SMG6-217ENST00000575338 LOC389332A0A1B0GUA5 103 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 J3KRW8 73 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 M0R143 59 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 TCAPO15273 167 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 NXPH4O95158 308 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 NDUFA7O95182 113 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 NPYP01303 97 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 CD7P09564 240 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 FCER1GP30273 86 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 TFPI2P48307 235 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 SSTP61278 116 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 LGALS9BQ3B8N2 356 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 PRR9Q5T870 116 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 LGALS9CQ6DKI2 356 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 C10orf99Q6UWK7 81 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 Q8N976 141 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 OR2K2Q8NGT1 345 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 CREBBPQ92793 2442 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 C14orf144Q96I85 54 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 RAX2Q96IS3 184 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 CLUHP3Q96NS8 147 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 PMCHL2Q9BQD1 86 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 ZNF747Q9BV97 191 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 CRYBG3Q68DQ2 2970 aa5.1□□□□□ -1.59
SMG6-217ENST00000575338 IGHV1OR15-1A0A075B7D0 117 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 MUC21A0A0G2JKD1 596 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 MUC21A0A140T8X8 626 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 F6UB75 175 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 PRB4P10163 310 aaPredicted RBP5.09□□□□□ -1.59
SMG6-217ENST00000575338 HLA-DRB4P13762 266 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 CD33P20138 364 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 EVI2AP22794 236 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 HNRNPA3P51991 378 aaKnown RBP5.09□□□□□ -1.59
SMG6-217ENST00000575338 SLURP1P55000 103 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 HILS1P60008 231 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 RPL32P62910 135 aaKnown RBP5.09□□□□□ -1.59
SMG6-217ENST00000575338 LAGE3Q14657 143 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 PIK3CD-AS1Q5SR53 167 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 MUC21Q5SSG8 566 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 LINC01545Q5VT33 79 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 LURAP1LQ8IV03 231 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 IFI27L1Q96BM0 104 aa5.09□□□□□ -1.59
SMG6-217ENST00000575338 MSRB1Q9NZV6 116 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms