RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
VPS33B-208ENST00000574755 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 MIEN1Q9BRT3 115 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 HSPB8Q9UJY1 196 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 CCDC168Q8NDH2 2452 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 PPBPP02775 128 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 SMIM15Q7Z3B0 74 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 Q8N2B8 174 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 MAP1LC3CQ9BXW4 147 aa10.58□□□□□ -0.72
VPS33B-208ENST00000574755 LGALS9O00182 355 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 SNAI2O43623 268 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 EVI2AP22794 236 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 KLHDC1Q8N7A1 406 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 FLNAP21333 2647 aaKnown RBP10.57□□□□□ -0.72
VPS33B-208ENST00000574755 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 TCF21O43680 179 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 KIR3DS1Q14943 382 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 MAJINQ3KP22 176 aa10.57□□□□□ -0.72
VPS33B-208ENST00000574755 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
VPS33B-208ENST00000574755 C20orf202A1L168 122 aa10.56□□□□□ -0.72
VPS33B-208ENST00000574755 H0Y8G0 127 aa10.56□□□□□ -0.72
VPS33B-208ENST00000574755 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
VPS33B-208ENST00000574755 S100A4P26447 101 aaKnown RBP10.56□□□□□ -0.72
VPS33B-208ENST00000574755 TEX29Q8N6K0 151 aa10.56□□□□□ -0.72
VPS33B-208ENST00000574755 SNRPD3P62318 126 aaKnown RBP10.55□□□□□ -0.72
VPS33B-208ENST00000574755 CACNG7P62955 275 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 DEFB136Q30KP8 78 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 PSMG4Q5JS54 123 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 MAP1LC3AQ9H492 121 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 OR4C46A6NHA9 309 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
VPS33B-208ENST00000574755 SONP18583 2426 aaKnown RBP10.55□□□□□ -0.72
VPS33B-208ENST00000574755 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 ASIPP42127 132 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 C18orf65Q6ZTR6 163 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 LAMTOR2Q9Y2Q5 125 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 A0A096LNJ9 63 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 TNFRSF6BO95407 300 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 KHDC1LQ5JSQ8 128 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 WFDC12Q8WWY7 111 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 ZNF747Q9BV97 191 aa10.54□□□□□ -0.72
VPS33B-208ENST00000574755 K7EQG2 157 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 M0R381 172 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 SLURP1P55000 103 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 LBHQ53QV2 105 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-208ENST00000574755 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 PDZD2O15018 2839 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 HELZ2Q9BYK8 2649 aaKnown RBP10.53□□□□□ -0.72
VPS33B-208ENST00000574755 KLLNB2CW77 178 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 EREGO14944 169 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 IGLC3P0DOY3 106 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 GATA1P15976 413 aaPredicted RBP10.53□□□□□ -0.72
VPS33B-208ENST00000574755 FXYD7P58549 80 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
VPS33B-208ENST00000574755 PHLDA3Q9Y5J5 127 aa10.53□□□□□ -0.72
VPS33B-208ENST00000574755 HBDP02042 147 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 SNHG12Q9BXW3 62 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 UQCR10Q9UDW1 63 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 TRAV26-2A0A0B4J265 109 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 M0R143 59 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 GNRH2O43555 120 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 SPRY2O43597 315 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 IGLL1P15814 213 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 TCTEX1D4Q5JR98 221 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 OR11H1Q8NG94 326 aa10.52□□□□□ -0.73
VPS33B-208ENST00000574755 LINC01619G3V211 115 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 IGKV3-20P01619 116 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 NXT2Q9NPJ8 142 aaKnown RBP10.51□□□□□ -0.73
VPS33B-208ENST00000574755 A0A0J9YX75 114 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 FAM159AQ6UWV7 190 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 DPF1Q92782 380 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 C2orf88Q9BSF0 95 aa10.51□□□□□ -0.73
VPS33B-208ENST00000574755 ITPR2Q14571 2701 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 MED14OSP0DP75 135 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 Q6ZSV7 163 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
VPS33B-208ENST00000574755 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 Q6ZN92 141 aa10.5□□□□□ -0.73
VPS33B-208ENST00000574755 LEPP41159 167 aa10.49□□□□□ -0.73
VPS33B-208ENST00000574755 KLHL30-AS1Q8NEE0 82 aa10.49□□□□□ -0.73
VPS33B-208ENST00000574755 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
VPS33B-208ENST00000574755 CUBNO60494 3623 aa10.49□□□□□ -0.73
VPS33B-208ENST00000574755 A0A1B0GV90 55 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 hDV102S1A0JD36 115 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 C7orf71A4D174 169 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 HSBP1L1C9JCN9 74 aa10.48□□□□□ -0.73
VPS33B-208ENST00000574755 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms