RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 TRAPPC1Q9Y5R8 145 aa7□□□□□ -1.29
NPLOC4-216ENST00000574344 X6R8D5 127 aa7□□□□□ -1.29
NPLOC4-216ENST00000574344 TRAV10A0A0B4J240 114 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 TRBV6-1A0A0K0K1D8 114 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 LTAP01374 205 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 TRGC1P0CF51 173 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 CT45A10P0DMU9 189 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 DEFB1P60022 68 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 OR5I1Q13606 314 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 GDF5OSQ5U4N7 250 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 EBLN2Q6P2I7 272 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 FOXI2Q6ZQN5 318 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 Q6ZTC4 211 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 ARL6IP6Q8N6S5 226 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 C16orf92Q96LL3 132 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 SLC50A1Q9BRV3 221 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 RPP21Q9H633 154 aaKnown RBP6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 ZNF586Q9NXT0 402 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 ZNF492Q9P255 531 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 KLF12Q9Y4X4 402 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 V9GYV3 84 aa6.99□□□□□ -1.29
NPLOC4-216ENST00000574344 H3BTX0 84 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 SLC17A3O00476 420 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 P01737 135 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 TCTAP57738 103 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 CT83Q5H943 113 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 SAMD13Q5VXD3 122 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 RASL11AQ6T310 242 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 GOLT1AQ6ZVE7 132 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 NHLRC2Q8NBF2 726 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 CSNK1G2-AS1Q8NCQ2 148 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 NDFIP1Q9BT67 221 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 RNASE7Q9H1E1 156 aaKnown RBP6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 NAT8BQ9UHF3 227 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 ZFP30Q9Y2G7 519 aa6.98□□□□□ -1.29
NPLOC4-216ENST00000574344 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 A0A087X0K7 114 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 TRAV34A0A0B4J273 112 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 XKRY2A2RUG3 117 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 A8MWL6 223 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 F6UB75 175 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 IGLV2-8P01709 118 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 HLA-DQA1P01909 254 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 SNRPCP09234 159 aaKnown RBP6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 EMP1P54849 157 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 SMUG1Q53HV7 270 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 ATP5L2Q7Z4Y8 100 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 PRNTQ86SH4 94 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 TMEM183AQ8IXX5 376 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 BORCS7Q96B45 105 aa6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
NPLOC4-216ENST00000574344 IGHV4-4A0A075B6R2 117 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 SMIM27A0A1W2PRY6 76 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 SOCS3O14543 225 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 HOXA5P20719 270 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 TCL1AP56279 114 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 RAB4BP61018 213 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 PSG3Q16557 428 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 Q6AWC8 147 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 TSKUQ8WUA8 353 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 LINC00479Q96M42 142 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 C12orf57Q99622 126 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 GNB1LQ9BYB4 327 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 GOLT1BQ9Y3E0 138 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 BIRC6Q9NR09 4857 aa6.96□□□□□ -1.3
NPLOC4-216ENST00000574344 A0A0J9YX75 114 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 TMEM189A5PLL7 270 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 DIRC3C9JPN6 131 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 MRPS12O15235 138 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 SAPCD1Q5SSQ6 148 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 MRPL53Q96EL3 112 aaKnown RBP6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 PSG8Q9UQ74 426 aa6.95□□□□□ -1.3
NPLOC4-216ENST00000574344 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 FAM231BA6NCW3 169 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 ZNF705FA8MVS1 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 ZNF705DP0CH99 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 ZNF705BP0CI00 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 SPART-AS1P0CW21 52 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 C12orf74Q32Q52 190 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 ZNF705AQ6ZN79 300 aaPredicted RBP6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 HIST3H2BBQ8N257 126 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 ZNF738Q8NE65 137 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 NUDT10Q8NFP7 164 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 TMEM18Q96B42 140 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 NUDT11Q96G61 164 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 NEU1Q99519 415 aa6.94□□□□□ -1.3
NPLOC4-216ENST00000574344 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms