RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 PSG8Q9UQ74 426 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 TRBV6-1A0A0K0K1D8 114 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 SPINK4O60575 86 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 H2AFB1P0C5Y9 115 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 P0DMU3 169 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 FAM231AP0DMU4 169 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 FAM231CP0DMU5 169 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 SULT1A2P50226 295 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 SMUG1Q53HV7 270 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 TMEM88Q6PEY1 159 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 Q6ZTI0 123 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 C9orf62Q8N4C0 152 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 KCNS1Q96KK3 526 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 KLF12Q9Y4X4 402 aa6.89□□□□□ -1.31
NDE1-210ENST00000574163 VPS13DQ5THJ4 4388 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 TRGV1A0A0A0MS02 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 GAGE12BA1L429 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 F5H768 121 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 TEX46H3BTG2 121 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 GAGE7O76087 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
NDE1-210ENST00000574163 GAGE12FP0CL80 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 GAGE12GP0CL81 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 GAGE12IP0CL82 117 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 TMEM183BQ1AE95 376 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 MUC21Q5SSG8 566 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 Q6ZQT7 251 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 COX8CQ7Z4L0 72 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 PRNTQ86SH4 94 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 TMEM183AQ8IXX5 376 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 FMC1Q96HJ9 113 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 SPXQ9BT56 116 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 SDF2L1Q9HCN8 221 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 MANBALQ9NQG1 85 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 ZFP30Q9Y2G7 519 aa6.88□□□□□ -1.31
NDE1-210ENST00000574163 TRGV2A0A075B6R0 118 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 H3BNG1 76 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 PAGE4O60829 102 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 GCGP01275 180 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 TXNDC17Q9BRA2 123 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 NAGKQ9UJ70 344 aa6.87□□□□□ -1.31
NDE1-210ENST00000574163 NACAE9PAV3 2078 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 TRAV34A0A0B4J273 112 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 IGHV3-16A0A0C4DH30 117 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 TYMSP04818 313 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
NDE1-210ENST00000574163 AKR1C3P42330 323 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
NDE1-210ENST00000574163 FAM3BP58499 235 aaPredicted RBP6.86□□□□□ -1.31
NDE1-210ENST00000574163 UBE2G1P62253 170 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 RNF212Q495C1 297 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 POM121L12Q8N7R1 296 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 C8orf49Q96NF6 230 aa6.86□□□□□ -1.31
NDE1-210ENST00000574163 M0R2P5 195 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 LTAP01374 205 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 RASL10AQ92737 203 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 LINC00479Q96M42 142 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
NDE1-210ENST00000574163 MDFICQ9P1T7 246 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
NDE1-210ENST00000574163 A0A1B0GV50 99 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 A0A1B0GVG6 124 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 SCO2A0A1W2PP80 73 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 FABP5P3A8MUU1 101 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 IFNA1P01562 189 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 HOXA5P20719 270 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 TAGLN2P37802 199 aaKnown RBP6.84□□□□□ -1.31
NDE1-210ENST00000574163 SLAQ13239 276 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 FAM162BQ5T6X4 162 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 PTH2Q96A98 100 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 GNG13Q9P2W3 67 aa6.84□□□□□ -1.31
NDE1-210ENST00000574163 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 TRAV4A0A0B4J268 109 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 OR5I1Q13606 314 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 ZC2HC1AQ96GY0 325 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
NDE1-210ENST00000574163 HYDINQ4G0P3 5121 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 GNRH2O43555 120 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 PDE6DO43924 150 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 CIDEAO60543 219 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 SH2D1AO60880 128 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 NUDT3O95989 172 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 BCL2P10415 239 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 MEF2BQ02080 365 aaPredicted RBP6.82□□□□□ -1.32
NDE1-210ENST00000574163 ZNF674Q2M3X9 581 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 DNLZQ5SXM8 178 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 PRO0255Q9UI72 69 aa6.82□□□□□ -1.32
NDE1-210ENST00000574163 IGKV3D-20A0A0C4DH25 116 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 B4DEV8 164 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 PAX4O43316 350 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 CXCL1P09341 107 aa6.81□□□□□ -1.32
NDE1-210ENST00000574163 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
NDE1-210ENST00000574163 ASIPP42127 132 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms