RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 NFE4Q86UQ8 179 aa14.39□□□□□ -0.11
CHRNB1-206ENST00000574054 Q8N1X5 172 aa14.39□□□□□ -0.11
CHRNB1-206ENST00000574054 TVP23CQ96ET8 276 aa14.39□□□□□ -0.11
CHRNB1-206ENST00000574054 SCRT2Q9NQ03 307 aa14.39□□□□□ -0.11
CHRNB1-206ENST00000574054 C9JCJ5 164 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 ARL14EPLP0DKL9 152 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 FUSP35637 526 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 WFDC10BQ8IUB3 73 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 ARL6IP6Q8N6S5 226 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 SGK494Q96LW2 274 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 TXNDC17Q9BRA2 123 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 SDF2L1Q9HCN8 221 aa14.38□□□□□ -0.11
CHRNB1-206ENST00000574054 TYMSP04818 313 aa14.37□□□□□ -0.11
CHRNB1-206ENST00000574054 CDC34P49427 236 aaPredicted RBP14.37□□□□□ -0.11
CHRNB1-206ENST00000574054 HSD17B11Q8NBQ5 300 aa14.37□□□□□ -0.11
CHRNB1-206ENST00000574054 ALG5Q9Y673 324 aa14.37□□□□□ -0.11
CHRNB1-206ENST00000574054 EVI2AP22794 236 aa14.36□□□□□ -0.11
CHRNB1-206ENST00000574054 ASB13Q8WXK3 278 aa14.36□□□□□ -0.11
CHRNB1-206ENST00000574054 NDFIP1Q9BT67 221 aa14.36□□□□□ -0.11
CHRNB1-206ENST00000574054 PGPEP1Q9NXJ5 209 aa14.36□□□□□ -0.11
CHRNB1-206ENST00000574054 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
CHRNB1-206ENST00000574054 NHLRC2Q8NBF2 726 aa14.35□□□□□ -0.11
CHRNB1-206ENST00000574054 KCNS1Q96KK3 526 aa14.35□□□□□ -0.11
CHRNB1-206ENST00000574054 MSRB1Q9NZV6 116 aa14.35□□□□□ -0.11
CHRNB1-206ENST00000574054 DNAH10OSP0CZ25 163 aa14.34□□□□□ -0.11
CHRNB1-206ENST00000574054 GCHFRP30047 84 aa14.33□□□□□ -0.12
CHRNB1-206ENST00000574054 C5orf17Q8NAS9 161 aa14.33□□□□□ -0.12
CHRNB1-206ENST00000574054 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.12
CHRNB1-206ENST00000574054 RAB24Q969Q5 203 aa14.33□□□□□ -0.12
CHRNB1-206ENST00000574054 SERTM2A0A1B0GWG4 89 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 K7EQM0 130 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 STAG3L3P0CL85 134 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 GATA1P15976 413 aaPredicted RBP14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 PPT1P50897 306 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
CHRNB1-206ENST00000574054 A0A087WTM6 91 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 FBLL1A6NHQ2 334 aaKnown RBP14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 K7EP13 123 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 TCRAP04437 139 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 CRYGDP07320 174 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 ATP6V0CP27449 155 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 CDPF1Q6NVV7 123 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 MED28Q9H204 178 aa14.31□□□□□ -0.12
CHRNB1-206ENST00000574054 MBP02144 154 aa14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 ZNF80P51504 273 aaPredicted RBP14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 ZNF876PQ49A33 203 aa14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 AQP10Q96PS8 301 aa14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 PSMG3Q9BT73 122 aaPredicted RBP14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 PSG8Q9UQ74 426 aa14.3□□□□□ -0.12
CHRNB1-206ENST00000574054 TAAR5O14804 337 aa14.29□□□□□ -0.12
CHRNB1-206ENST00000574054 GCGP01275 180 aa14.29□□□□□ -0.12
CHRNB1-206ENST00000574054 C10orf126Q8N4M7 172 aa14.29□□□□□ -0.12
CHRNB1-206ENST00000574054 SH3BGRL3Q9H299 93 aa14.29□□□□□ -0.12
CHRNB1-206ENST00000574054 C11orf21Q9P2W6 132 aa14.29□□□□□ -0.12
CHRNB1-206ENST00000574054 IGHV3-73A0A0B4J1V6 119 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 CXorf1O96002 111 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 SUMO1P63165 101 aaKnown RBP14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 ZFP69Q49AA0 526 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 PRNTQ86SH4 94 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 SUN5Q8TC36 379 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 TMEM167BQ9NRX6 74 aa14.28□□□□□ -0.12
CHRNB1-206ENST00000574054 GGTLC3B5MD39 225 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 TIRAPP58753 221 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 SERF2P84101 59 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 FLI1Q01543 452 aaPredicted RBP14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 SMUG1Q53HV7 270 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 CFAP126Q5VTH2 177 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 DPPA3Q6W0C5 159 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 CYB561D1Q8N8Q1 229 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 SLC25A29Q8N8R3 303 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 TMEM75Q8N9X5 138 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 PRADC1Q9BSG0 188 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 ACTR3CQ9C0K3 210 aaPredicted RBP14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 EPDR1Q9UM22 224 aa14.27□□□□□ -0.13
CHRNB1-206ENST00000574054 IGHV3-38A0A0C4DH36 116 aa14.26□□□□□ -0.13
CHRNB1-206ENST00000574054 RS1O15537 224 aa14.26□□□□□ -0.13
CHRNB1-206ENST00000574054 PTTG1O95997 202 aa14.26□□□□□ -0.13
CHRNB1-206ENST00000574054 PFN1P07737 140 aaKnown RBP14.26□□□□□ -0.13
CHRNB1-206ENST00000574054 IGLV2-11P01706 119 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 RHOHQ15669 191 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 Q5BKY6 102 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 OR10J3Q5JRS4 329 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 C9orf85Q96MD7 179 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 BATF3Q9NR55 127 aa14.25□□□□□ -0.13
CHRNB1-206ENST00000574054 TRAV8-6A0A0B4J262 113 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 EPM2AB3EWF7 344 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 PSCAO43653 123 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 KRTAP10-1P60331 282 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 ZNF506Q5JVG8 444 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 INO80EQ8NBZ0 244 aaPredicted RBP14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 TNFSF18Q9UNG2 199 aa14.24□□□□□ -0.13
CHRNB1-206ENST00000574054 PGPEP1LA6NFU8 196 aa14.23□□□□□ -0.13
CHRNB1-206ENST00000574054 CIDEAO60543 219 aa14.23□□□□□ -0.13
CHRNB1-206ENST00000574054 LINC01556Q5JQF7 62 aa14.23□□□□□ -0.13
CHRNB1-206ENST00000574054 FXYD6-FXYD2A0A087WZ82 144 aa14.22□□□□□ -0.13
CHRNB1-206ENST00000574054 BORCS7-ASMTA0A0B4J1R7 106 aa14.22□□□□□ -0.13
CHRNB1-206ENST00000574054 TRAV34A0A0B4J273 112 aa14.22□□□□□ -0.13
CHRNB1-206ENST00000574054 TRBV6-4A0A1B0GX49 114 aa14.22□□□□□ -0.13
CHRNB1-206ENST00000574054 GIPP09681 153 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms