RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 HSPB11Q9Y547 144 aa14.74□□□□□ -0.05
SNF8-216ENST00000573795 F6UZH7 168 aa14.73□□□□□ -0.05
SNF8-216ENST00000573795 PPP1R1CQ8WVI7 109 aa14.73□□□□□ -0.05
SNF8-216ENST00000573795 RPH3ALQ9UNE2 315 aa14.73□□□□□ -0.05
SNF8-216ENST00000573795 TRAV8-1A0A0A6YYK1 113 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 IGHV3-38A0A0C4DH36 116 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 PGPA6NDG6 321 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 TAS2R45P59539 299 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 LINC01556Q5JQF7 62 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 GOLT1AQ6ZVE7 132 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 ENKURQ8TC29 256 aa14.72□□□□□ -0.05
SNF8-216ENST00000573795 TRAV21A0A0B4J279 112 aa14.71□□□□□ -0.05
SNF8-216ENST00000573795 CYCSP99999 105 aaKnown RBP14.71□□□□□ -0.05
SNF8-216ENST00000573795 SMIM3Q9BZL3 60 aa14.71□□□□□ -0.05
SNF8-216ENST00000573795 MBD2Q9UBB5 411 aa14.71□□□□□ -0.05
SNF8-216ENST00000573795 IGLV5-52A0A0A0MRZ9 124 aa14.7□□□□□ -0.06
SNF8-216ENST00000573795 IFITM3Q01628 133 aa14.7□□□□□ -0.06
SNF8-216ENST00000573795 LINC00299Q6ZSB3 139 aa14.7□□□□□ -0.06
SNF8-216ENST00000573795 SH2D6Q7Z4S9 175 aa14.7□□□□□ -0.06
SNF8-216ENST00000573795 NHLRC2Q8NBF2 726 aa14.7□□□□□ -0.06
SNF8-216ENST00000573795 IBA57-AS1B1ANH7 110 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 MPC2O95563 127 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 GNG5P63218 68 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 DPPA3Q6W0C5 159 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 CMTM2Q8TAZ6 248 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 TMEM70Q9BUB7 260 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 WFDC1Q9HC57 220 aa14.69□□□□□ -0.06
SNF8-216ENST00000573795 PPT1P50897 306 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 ARL6IP6Q8N6S5 226 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 SLC25A29Q8N8R3 303 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 NTN5Q8WTR8 489 aaPredicted RBP14.68□□□□□ -0.06
SNF8-216ENST00000573795 SDF2L1Q9HCN8 221 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 TREM1Q9NP99 234 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 C11orf21Q9P2W6 132 aa14.68□□□□□ -0.06
SNF8-216ENST00000573795 FBLL1A6NHQ2 334 aaKnown RBP14.67□□□□□ -0.06
SNF8-216ENST00000573795 INMT-MINDY4F8WBC2 141 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 PSCAO43653 123 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 UPK1BO75841 260 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 Q8N814 137 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 SCGB1C1Q8TD33 95 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 S100ZQ8WXG8 99 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 FAM30AQ9NZY2 134 aa14.67□□□□□ -0.06
SNF8-216ENST00000573795 RS1O15537 224 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 RPL12P30050 165 aaKnown RBP14.66□□□□□ -0.06
SNF8-216ENST00000573795 RAB2AP61019 212 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 FAM74A1Q5RGS3 127 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 CFAP126Q5VTH2 177 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 PQLC2Q6ZP29 291 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 ASB13Q8WXK3 278 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 KCNS1Q96KK3 526 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 Q9HAA7 133 aa14.66□□□□□ -0.06
SNF8-216ENST00000573795 FAM229AH3BQW9 127 aa14.65□□□□□ -0.06
SNF8-216ENST00000573795 ZNF80P51504 273 aaPredicted RBP14.65□□□□□ -0.06
SNF8-216ENST00000573795 Q6ZSN1 163 aa14.65□□□□□ -0.06
SNF8-216ENST00000573795 SGK494Q96LW2 274 aa14.65□□□□□ -0.06
SNF8-216ENST00000573795 HMGB3O15347 200 aaKnown RBP14.64□□□□□ -0.07
SNF8-216ENST00000573795 PFN1P07737 140 aaKnown RBP14.64□□□□□ -0.07
SNF8-216ENST00000573795 ZNF876PQ49A33 203 aa14.64□□□□□ -0.07
SNF8-216ENST00000573795 MARVELD1Q9BSK0 173 aa14.64□□□□□ -0.07
SNF8-216ENST00000573795 TRAV8-6A0A0B4J262 113 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 TRBV6-4A0A1B0GX49 114 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 IGHV3-30P01768 117 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 IGHV3-33P01772 117 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 IGHV3-30-3P0DP02 117 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 IGHV3-30-5P0DP03 117 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 RHOHQ15669 191 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 ACOT6Q3I5F7 207 aaPredicted RBP14.63□□□□□ -0.07
SNF8-216ENST00000573795 OR10J3Q5JRS4 329 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 C9orf85Q96MD7 179 aa14.63□□□□□ -0.07
SNF8-216ENST00000573795 IGHV3-73A0A0B4J1V6 119 aa14.62□□□□□ -0.07
SNF8-216ENST00000573795 PET100P0DJ07 73 aa14.62□□□□□ -0.07
SNF8-216ENST00000573795 WFDC2Q14508 124 aa14.62□□□□□ -0.07
SNF8-216ENST00000573795 LELP1Q5T871 98 aa14.62□□□□□ -0.07
SNF8-216ENST00000573795 TMEM75Q8N9X5 138 aa14.62□□□□□ -0.07
SNF8-216ENST00000573795 A0A1W2PPV4 95 aa14.61□□□□□ -0.07
SNF8-216ENST00000573795 Q8N3U1 123 aa14.61□□□□□ -0.07
SNF8-216ENST00000573795 PRADC1Q9BSG0 188 aa14.61□□□□□ -0.07
SNF8-216ENST00000573795 PGPEP1LA6NFU8 196 aa14.6□□□□□ -0.07
SNF8-216ENST00000573795 ARL14EPLP0DKL9 152 aa14.6□□□□□ -0.07
SNF8-216ENST00000573795 ZNF506Q5JVG8 444 aa14.6□□□□□ -0.07
SNF8-216ENST00000573795 OR10G9Q8NGN4 311 aa14.6□□□□□ -0.07
SNF8-216ENST00000573795 OR10G7Q8NGN6 311 aa14.6□□□□□ -0.07
SNF8-216ENST00000573795 SSNA1O43805 119 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 CIDEAO60543 219 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 IGLV2-11P01706 119 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 TCRAP04437 139 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 SUN5Q8TC36 379 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 PTH2Q96A98 100 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 GTSF1LQ9H1H1 148 aa14.59□□□□□ -0.07
SNF8-216ENST00000573795 LRP1Q07954 4544 aaKnown RBP14.58□□□□□ -0.08
SNF8-216ENST00000573795 GCGP01275 180 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 STAG3L2P0CL84 134 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 STAG3L3P0CL85 134 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 RNASE3P12724 160 aaKnown RBP14.58□□□□□ -0.08
SNF8-216ENST00000573795 LAGE3Q14657 143 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 NDFIP1Q9BT67 221 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 BOLA1Q9Y3E2 137 aa14.58□□□□□ -0.08
SNF8-216ENST00000573795 SERTM2A0A1B0GWG4 89 aa14.57□□□□□ -0.08
SNF8-216ENST00000573795 C1QBP02746 253 aa14.57□□□□□ -0.08
SNF8-216ENST00000573795 LINC00694P0DN24 101 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms