RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 RPL19P84098 196 aaKnown RBP6.57□□□□□ -1.36
NDE1-207ENST00000573203 RBMY1FQ15415 496 aaKnown RBP6.57□□□□□ -1.36
NDE1-207ENST00000573203 COX19Q49B96 90 aa6.57□□□□□ -1.36
NDE1-207ENST00000573203 CMTM2Q8TAZ6 248 aa6.57□□□□□ -1.36
NDE1-207ENST00000573203 BLNKQ8WV28 456 aa6.57□□□□□ -1.36
NDE1-207ENST00000573203 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
NDE1-207ENST00000573203 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 TGIF2-C20orf24A0A0A6YYL0 155 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 FAM231BA6NCW3 169 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 PHOX2AO14813 284 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 LY6G6CO95867 125 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 RPS10P46783 165 aaKnown RBP6.56□□□□□ -1.36
NDE1-207ENST00000573203 ERVFC1-1P60608 527 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 UBE2G1P62253 170 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 CT83Q5H943 113 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 TMEM183AQ8IXX5 376 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 TMEM75Q8N9X5 138 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 MRPL53Q96EL3 112 aaKnown RBP6.56□□□□□ -1.36
NDE1-207ENST00000573203 C17orf77Q96MU5 243 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 CLUHP3Q96NS8 147 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 AAMDCQ9H7C9 122 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 ZNF492Q9P255 531 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 URGCP-MRPS24S4R325 110 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 V9GYV3 84 aa6.56□□□□□ -1.36
NDE1-207ENST00000573203 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 DUSP14O95147 198 aaKnown RBP6.55□□□□□ -1.36
NDE1-207ENST00000573203 IGLV2-11P01706 119 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 CSN1S1P47710 185 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 RNF182Q8N6D2 247 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 ZNF738Q8NE65 137 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 LINC00479Q96M42 142 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 SLC50A1Q9BRV3 221 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 ZNF331Q9NQX6 463 aaPredicted RBP6.55□□□□□ -1.36
NDE1-207ENST00000573203 PPP1R14DQ9NXH3 145 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 HYDINQ4G0P3 5121 aa6.55□□□□□ -1.36
NDE1-207ENST00000573203 TRAV8-2A0A0B4J237 113 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 SMIM27A0A1W2PRY6 76 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 RBAKDNA6NC62 111 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 C19orf71A6NCJ1 209 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
NDE1-207ENST00000573203 DIRC3C9JPN6 131 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
NDE1-207ENST00000573203 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
NDE1-207ENST00000573203 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 PSG3Q16557 428 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 IBA57Q5T440 356 aaKnown RBP6.54□□□□□ -1.36
NDE1-207ENST00000573203 RASL11AQ6T310 242 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
NDE1-207ENST00000573203 NEU1Q99519 415 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
NDE1-207ENST00000573203 TRAV10A0A0B4J240 114 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 TMEM189A5PLL7 270 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 SMIM9A6NGZ8 99 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 A8MTW9 85 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 NPIPB6E9PJ23 425 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 AMBPP02760 352 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 S100A6P06703 90 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 SNRPCP09234 159 aaKnown RBP6.53□□□□□ -1.36
NDE1-207ENST00000573203 FOXA3P55318 350 aaPredicted RBP6.53□□□□□ -1.36
NDE1-207ENST00000573203 GNG5P63218 68 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 OR5I1Q13606 314 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 SAPCD1Q5SSQ6 148 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 Q6ZTC4 211 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 EXOC3-AS1Q8N2X6 119 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 NUDT10Q8NFP7 164 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 NUDT11Q96G61 164 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 TMEM208Q9BTX3 173 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
NDE1-207ENST00000573203 TRAV34A0A0B4J273 112 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 A0A1W2PPQ1 181 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 IGLL5B9A064 214 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 M0R2Z0 102 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
NDE1-207ENST00000573203 MT-ND6P03923 174 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 TRGC2P03986 189 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 EMP1P54849 157 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H1AQ02539 215 aaPredicted RBP6.52□□□□□ -1.37
NDE1-207ENST00000573203 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 COA6Q5JTJ3 125 aaKnown RBP6.52□□□□□ -1.37
NDE1-207ENST00000573203 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 GOLT1AQ6ZVE7 132 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 Q86TA4 180 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 OR8A1Q8NGG7 326 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 PSG8Q9UQ74 426 aa6.52□□□□□ -1.37
NDE1-207ENST00000573203 ZNF705GA8MUZ8 300 aaPredicted RBP6.51□□□□□ -1.37
NDE1-207ENST00000573203 A8MWL6 223 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 H3BTX0 84 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 SLC17A3O00476 420 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 INSP01308 110 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 SPART-AS1P0CW21 52 aa6.51□□□□□ -1.37
NDE1-207ENST00000573203 MGST1P10620 155 aaKnown RBP6.51□□□□□ -1.37
NDE1-207ENST00000573203 HOXA5P20719 270 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms