RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 ASPHD1Q5U4P2 390 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 SIGLEC15Q6ZMC9 328 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 FAM216BQ8N7L0 139 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 PHLDA1Q8WV24 401 aaPredicted RBP5.12□□□□□ -1.59
NUP88-206ENST00000573169 SRSF12Q8WXF0 261 aaKnown RBP5.12□□□□□ -1.59
NUP88-206ENST00000573169 ZC2HC1AQ96GY0 325 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 KAAG1Q9UBP8 84 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 PSG8Q9UQ74 426 aa5.12□□□□□ -1.59
NUP88-206ENST00000573169 F11RQ9Y624 299 aaKnown RBP5.12□□□□□ -1.59
NUP88-206ENST00000573169 MGAM2Q2M2H8 2515 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 WI2-2373I1.2A0A1W2PRP0 233 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 TEX22C9J3V5 150 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 E9PLD3 99 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 H3BUT2 72 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 I3L2K1 104 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 ZNF207O43670 478 aaKnown RBP5.11□□□□□ -1.59
NUP88-206ENST00000573169 SMIM13P0DJ93 91 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 FABP2P12104 132 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 EVI2AP22794 236 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 CD24P25063 80 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 IFI27P40305 119 aaPredicted RBP5.11□□□□□ -1.59
NUP88-206ENST00000573169 RPL27AP46776 148 aaKnown RBP5.11□□□□□ -1.59
NUP88-206ENST00000573169 KLRD1Q13241 179 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 C10orf55Q5SWW7 151 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 TMEM200BQ69YZ2 307 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 HIST2H2BDQ6DRA6 164 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 LCNL1Q6ZST4 164 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 ERASQ7Z444 233 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 VMO1Q7Z5L0 202 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 IFI27L1Q96BM0 104 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 ZNF414Q96IQ9 312 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 PRELID3AQ96N28 172 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 VGLL1Q99990 258 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 ONECUT1Q9UBC0 465 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 HHLA3Q9XRX5 114 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 SPCS1Q9Y6A9 102 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
NUP88-206ENST00000573169 DSCAML1Q8TD84 2053 aa5.11□□□□□ -1.59
NUP88-206ENST00000573169 A0A1B0GWB2 263 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 CLPSL1A2RUU4 121 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 F8W1H4 67 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 NDUFA7O95182 113 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 IGKV1-17P01599 117 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 RBP4P02753 201 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 IGLC6P0CF74 106 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 MRPL51Q4U2R6 128 aaKnown RBP5.1□□□□□ -1.59
NUP88-206ENST00000573169 GOLT1AQ6ZVE7 132 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 LY6G5BQ8NDX9 201 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 CITED1Q99966 193 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 SPATA25Q9BR10 227 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 SIGLEC9Q9Y336 463 aa5.1□□□□□ -1.59
NUP88-206ENST00000573169 TRAV8-1A0A0A6YYK1 113 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 SLC25A17O43808 307 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 ATP5LO75964 103 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 IGLV1-47P01700 117 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 FAM106CPP0CH98 169 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 TMEM11P17152 192 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 FCER1GP30273 86 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 CACNG7P62955 275 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 ODF1Q14990 250 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 CD300EQ496F6 205 aaPredicted RBP5.09□□□□□ -1.59
NUP88-206ENST00000573169 FAM106AQ4KMX7 169 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 ZNF562Q6V9R5 426 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 Q6ZSV7 163 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 LINC01006Q8NI28 216 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 SGK494Q96LW2 274 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 MCRIP2Q9BUT9 160 aaKnown RBP5.09□□□□□ -1.59
NUP88-206ENST00000573169 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
NUP88-206ENST00000573169 THYN1Q9P016 225 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 ZNRD1Q9P1U0 126 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
NUP88-206ENST00000573169 D6R8Y8 96 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 J3QR89 54 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 NPFFO15130 113 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 NDUFB3O43676 98 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 CSN3P07498 182 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 CCL3L1P16619 93 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 PROK1P58294 105 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 PLGLAQ15195 96 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 KLK9Q2XQG4 91 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 SAMD13Q5VXD3 122 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 LYZL1Q6UWQ5 148 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 PCP2Q8IVA1 136 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 EXOC3-AS1Q8N2X6 119 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 ZNF491Q8N8L2 437 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 OR8A1Q8NGG7 326 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 FAM110DQ8TAY7 271 aaPredicted RBP5.08□□□□□ -1.6
NUP88-206ENST00000573169 ZNF502Q8TBZ5 544 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 SIGMAR1Q99720 223 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
NUP88-206ENST00000573169 KLK9Q9UKQ9 250 aa5.08□□□□□ -1.6
NUP88-206ENST00000573169 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
NUP88-206ENST00000573169 IGLV2-18A0A075B6J9 118 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms