RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 C11orf45Q8TAV5 145 aa15.74■□□□□ 0.11
RAB40B-207ENST00000572603 PGPEP1LA6NFU8 196 aa15.73■□□□□ 0.11
RAB40B-207ENST00000572603 FABP5P3A8MUU1 101 aa15.73■□□□□ 0.11
RAB40B-207ENST00000572603 TYMSP04818 313 aa15.73■□□□□ 0.11
RAB40B-207ENST00000572603 GSN-AS1Q9NRJ2 163 aa15.73■□□□□ 0.11
RAB40B-207ENST00000572603 IGKV3D-20A0A0C4DH25 116 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 CXorf65A6NEN9 183 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 LYRM9A8MSI8 78 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 C9JCJ5 164 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 SPART-AS1P0CW21 52 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 GNG4P50150 75 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 TCL1AP56279 114 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 C12orf74Q32Q52 190 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 FAM162BQ5T6X4 162 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 MUC7Q8TAX7 377 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 SMIM12Q96EX1 92 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 MDFICQ9P1T7 246 aa15.72■□□□□ 0.11
RAB40B-207ENST00000572603 TRGV11A0A075B6L2 103 aa15.71■□□□□ 0.11
RAB40B-207ENST00000572603 IGHV3-16A0A0C4DH30 117 aa15.71■□□□□ 0.11
RAB40B-207ENST00000572603 GNRH2O43555 120 aa15.71■□□□□ 0.11
RAB40B-207ENST00000572603 KCNS1Q96KK3 526 aa15.71■□□□□ 0.11
RAB40B-207ENST00000572603 SDF2L1Q9HCN8 221 aa15.71■□□□□ 0.11
RAB40B-207ENST00000572603 NOP10Q9NPE3 64 aaKnown RBP15.71■□□□□ 0.11
RAB40B-207ENST00000572603 TIMM8BQ9Y5J9 83 aaPredicted RBP15.71■□□□□ 0.11
RAB40B-207ENST00000572603 TEX48A0A1B0GUV7 120 aa15.7■□□□□ 0.1
RAB40B-207ENST00000572603 ZNF415Q09FC8 603 aa15.7■□□□□ 0.1
RAB40B-207ENST00000572603 DAZ2Q13117 558 aaKnown RBP15.7■□□□□ 0.1
RAB40B-207ENST00000572603 LINC00612Q8N6U2 182 aa15.7■□□□□ 0.1
RAB40B-207ENST00000572603 PLECQ15149 4684 aaKnown RBP15.7■□□□□ 0.1
RAB40B-207ENST00000572603 SNURFLB1AK76 121 aa15.69■□□□□ 0.1
RAB40B-207ENST00000572603 LINC01559Q495D7 138 aa15.69■□□□□ 0.1
RAB40B-207ENST00000572603 Q6ZTC4 211 aa15.69■□□□□ 0.1
RAB40B-207ENST00000572603 ZNF575Q86XF7 245 aa15.69■□□□□ 0.1
RAB40B-207ENST00000572603 KRBOX1C9JBD0 128 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 CEBPGP53567 150 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 PEA15Q15121 130 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 PRR27Q6MZM9 219 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 SMDT1Q9H4I9 107 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 MUC4Q99102 2169 aa15.68■□□□□ 0.1
RAB40B-207ENST00000572603 M0R036 132 aa15.67■□□□□ 0.1
RAB40B-207ENST00000572603 C19orf71A6NCJ1 209 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 B4DEV8 164 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 K7EN84 100 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 SPINK4O60575 86 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 MGST1P10620 155 aaKnown RBP15.66■□□□□ 0.1
RAB40B-207ENST00000572603 Q6ZTI0 123 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 SMIM7Q9BQ49 75 aa15.66■□□□□ 0.1
RAB40B-207ENST00000572603 ORM1P02763 201 aa15.65■□□□□ 0.1
RAB40B-207ENST00000572603 RNASE3P12724 160 aaKnown RBP15.65■□□□□ 0.1
RAB40B-207ENST00000572603 DAD1P61803 113 aa15.65■□□□□ 0.1
RAB40B-207ENST00000572603 OCC1Q8TAD7 63 aa15.65■□□□□ 0.1
RAB40B-207ENST00000572603 C9orf85Q96MD7 179 aa15.65■□□□□ 0.1
RAB40B-207ENST00000572603 DEFB130BP0DP73 79 aa15.64■□□□□ 0.09
RAB40B-207ENST00000572603 DEFB130AP0DP74 79 aa15.64■□□□□ 0.09
RAB40B-207ENST00000572603 RPL19P84098 196 aaKnown RBP15.64■□□□□ 0.09
RAB40B-207ENST00000572603 OR5I1Q13606 314 aa15.64■□□□□ 0.09
RAB40B-207ENST00000572603 DNLZQ5SXM8 178 aa15.64■□□□□ 0.09
RAB40B-207ENST00000572603 ZFAND6Q6FIF0 208 aa15.64■□□□□ 0.09
RAB40B-207ENST00000572603 PHLDA1Q8WV24 401 aaPredicted RBP15.64■□□□□ 0.09
RAB40B-207ENST00000572603 ZNF727A8MUV8 499 aa15.63■□□□□ 0.09
RAB40B-207ENST00000572603 C3orf84H3BNL1 204 aa15.63■□□□□ 0.09
RAB40B-207ENST00000572603 SPXQ9BT56 116 aa15.63■□□□□ 0.09
RAB40B-207ENST00000572603 MRPL16Q9NX20 251 aaKnown RBP15.63■□□□□ 0.09
RAB40B-207ENST00000572603 LY96Q9Y6Y9 160 aa15.63■□□□□ 0.09
RAB40B-207ENST00000572603 TENM2Q9NT68 2774 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 TMSB15BA0A087X1C1 80 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 TRGV1A0A0A0MS02 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GAGE12BA1L429 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GAGE7O76087 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GAGE12FP0CL80 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GAGE12GP0CL81 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GAGE12IP0CL82 117 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 NACAE9PAV3 2078 aa15.62■□□□□ 0.09
RAB40B-207ENST00000572603 GRIFINA4D1Z8 144 aa15.61■□□□□ 0.09
RAB40B-207ENST00000572603 CXCL1P09341 107 aa15.61■□□□□ 0.09
RAB40B-207ENST00000572603 ASIPP42127 132 aa15.61■□□□□ 0.09
RAB40B-207ENST00000572603 LGALS9BQ3B8N2 356 aa15.61■□□□□ 0.09
RAB40B-207ENST00000572603 TRAV10A0A0B4J240 114 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 FAM74A3Q4VXF1 159 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 CASC10Q5T4H9 136 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 LINC01551Q86U37 167 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 C18orf15Q96N68 181 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 BIN3Q9NQY0 253 aa15.6■□□□□ 0.09
RAB40B-207ENST00000572603 H3BVH4 76 aa15.59■□□□□ 0.09
RAB40B-207ENST00000572603 M0R2P5 195 aa15.59■□□□□ 0.09
RAB40B-207ENST00000572603 CEMP1Q6PRD7 247 aaPredicted RBP15.59■□□□□ 0.09
RAB40B-207ENST00000572603 RASL10AQ92737 203 aa15.59■□□□□ 0.09
RAB40B-207ENST00000572603 IL36BQ9NZH7 164 aa15.59■□□□□ 0.09
RAB40B-207ENST00000572603 NUPR2A6NF83 97 aa15.58■□□□□ 0.08
RAB40B-207ENST00000572603 NUDT10Q8NFP7 164 aa15.58■□□□□ 0.08
RAB40B-207ENST00000572603 NUDT11Q96G61 164 aa15.58■□□□□ 0.08
RAB40B-207ENST00000572603 RNASE7Q9H1E1 156 aaKnown RBP15.58■□□□□ 0.08
RAB40B-207ENST00000572603 SCRT2Q9NQ03 307 aa15.58■□□□□ 0.08
RAB40B-207ENST00000572603 ALMS1Q8TCU4 4167 aa15.57■□□□□ 0.08
RAB40B-207ENST00000572603 DEFB131BA0A096LNP1 70 aa15.57■□□□□ 0.08
RAB40B-207ENST00000572603 LINC00862A6NCI5 91 aa15.57■□□□□ 0.08
RAB40B-207ENST00000572603 S100A4P26447 101 aaKnown RBP15.57■□□□□ 0.08
RAB40B-207ENST00000572603 SOHLH1Q5JUK2 328 aa15.57■□□□□ 0.08
RAB40B-207ENST00000572603 PTH2Q96A98 100 aa15.57■□□□□ 0.08
RAB40B-207ENST00000572603 DAZAP1Q96EP5 407 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms