RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
CCDC40-206ENST00000572083 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
CCDC40-206ENST00000572083 TDRG1Q3Y452 100 aa13.08□□□□□ -0.32
CCDC40-206ENST00000572083 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
CCDC40-206ENST00000572083 THAP6Q8TBB0 222 aa13.07□□□□□ -0.32
CCDC40-206ENST00000572083 CENPXA8MT69 81 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 OR7C2O60412 319 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 TYMSP04818 313 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 RHOHQ15669 191 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 LENEPQ9Y5L5 61 aa13.06□□□□□ -0.32
CCDC40-206ENST00000572083 IGHV3-73A0A0B4J1V6 119 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 RAB32Q13637 225 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 ATP6V1FQ16864 119 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 BAALCQ8WXS3 180 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 C2orf50Q96LR7 162 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 CHAC1Q9BUX1 264 aa13.05□□□□□ -0.32
CCDC40-206ENST00000572083 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
CCDC40-206ENST00000572083 GTSF1LQ9H1H1 148 aa13.04□□□□□ -0.32
CCDC40-206ENST00000572083 RPH3ALQ9UNE2 315 aa13.04□□□□□ -0.32
CCDC40-206ENST00000572083 TRAV8-3A0A0A6YYJ7 113 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 F6UZH7 168 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 UBE2L3P68036 154 aaKnown RBP13.03□□□□□ -0.32
CCDC40-206ENST00000572083 CFAP126Q5VTH2 177 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 DPPA3Q6W0C5 159 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 DAZ4Q86SG3 579 aaKnown RBP13.03□□□□□ -0.32
CCDC40-206ENST00000572083 CIRBP-AS1Q8TBR5 109 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 HYLS1Q96M11 299 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 SDHCQ99643 169 aaPredicted RBP13.03□□□□□ -0.32
CCDC40-206ENST00000572083 SDF2L1Q9HCN8 221 aa13.03□□□□□ -0.32
CCDC40-206ENST00000572083 DAZ3Q9NR90 486 aaKnown RBP13.03□□□□□ -0.32
CCDC40-206ENST00000572083 TRBV6-4A0A1B0GX49 114 aa13.02□□□□□ -0.33
CCDC40-206ENST00000572083 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.33
CCDC40-206ENST00000572083 CCDC160A6NGH7 325 aa13.02□□□□□ -0.33
CCDC40-206ENST00000572083 ZNF876PQ49A33 203 aa13.02□□□□□ -0.33
CCDC40-206ENST00000572083 ATP6V0E2Q8NHE4 81 aa13.02□□□□□ -0.33
CCDC40-206ENST00000572083 TRAV21A0A0B4J279 112 aa13.01□□□□□ -0.33
CCDC40-206ENST00000572083 NHLH2Q02577 135 aa13.01□□□□□ -0.33
CCDC40-206ENST00000572083 OR5C1Q8NGR4 320 aa13.01□□□□□ -0.33
CCDC40-206ENST00000572083 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
CCDC40-206ENST00000572083 TRAV6A0A075B6T7 132 aa13□□□□□ -0.33
CCDC40-206ENST00000572083 RS1O15537 224 aa13□□□□□ -0.33
CCDC40-206ENST00000572083 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
CCDC40-206ENST00000572083 ASB13Q8WXK3 278 aa13□□□□□ -0.33
CCDC40-206ENST00000572083 ATP5SQ99766 215 aa13□□□□□ -0.33
CCDC40-206ENST00000572083 IL15RAQ13261 267 aa12.99□□□□□ -0.33
CCDC40-206ENST00000572083 TRAV8-1A0A0A6YYK1 113 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 IGLV2-8P01709 118 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 IL7P13232 177 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 ASAH1Q13510 395 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 TVP23CQ96ET8 276 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
CCDC40-206ENST00000572083 GGTLC3B5MD39 225 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC40-206ENST00000572083 TOR2AQ5JU69 321 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 GOLT1AQ6ZVE7 132 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 Q8N976 141 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 DNAJC30Q96LL9 226 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 WDR61Q9GZS3 305 aaKnown RBP12.97□□□□□ -0.33
CCDC40-206ENST00000572083 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 KCNIP2Q9NS61 270 aa12.97□□□□□ -0.33
CCDC40-206ENST00000572083 CIDEAO60543 219 aa12.96□□□□□ -0.33
CCDC40-206ENST00000572083 MGST1P10620 155 aaKnown RBP12.96□□□□□ -0.33
CCDC40-206ENST00000572083 HNRNPA3P51991 378 aaKnown RBP12.96□□□□□ -0.33
CCDC40-206ENST00000572083 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.33
CCDC40-206ENST00000572083 CMTM2Q8TAZ6 248 aa12.96□□□□□ -0.33
CCDC40-206ENST00000572083 NMES1Q9C002 83 aa12.96□□□□□ -0.33
CCDC40-206ENST00000572083 NUDT15Q9NV35 164 aa12.96□□□□□ -0.33
CCDC40-206ENST00000572083 COX11Q9Y6N1 276 aa12.96□□□□□ -0.33
CCDC40-206ENST00000572083 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 PGPA6NDG6 321 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 GAGE12JA6NER3 117 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 PLA2G10O15496 165 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 TCRBP04435 133 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
CCDC40-206ENST00000572083 GAGE1Q13065 139 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 GAGE4Q13068 117 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 GAGE5Q13069 117 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 GAGE13Q4V321 117 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 OTORQ9NRC9 128 aa12.95□□□□□ -0.34
CCDC40-206ENST00000572083 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
CCDC40-206ENST00000572083 PGPEP1LA6NFU8 196 aa12.94□□□□□ -0.34
CCDC40-206ENST00000572083 LYRM1O43325 122 aa12.94□□□□□ -0.34
CCDC40-206ENST00000572083 C11orf21Q9P2W6 132 aa12.94□□□□□ -0.34
CCDC40-206ENST00000572083 C17orf112F2Z3M2 114 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 LINC00694P0DN24 101 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 TMEM75Q8N9X5 138 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 RMI2Q96E14 147 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 SGK494Q96LW2 274 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 C9orf85Q96MD7 179 aa12.93□□□□□ -0.34
CCDC40-206ENST00000572083 GNG5P63218 68 aa12.92□□□□□ -0.34
CCDC40-206ENST00000572083 FFAR4Q5NUL3 377 aa12.92□□□□□ -0.34
CCDC40-206ENST00000572083 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
CCDC40-206ENST00000572083 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-206ENST00000572083 TAS2R45P59539 299 aa12.91□□□□□ -0.34
CCDC40-206ENST00000572083 DAZAP1Q96EP5 407 aaKnown RBP12.91□□□□□ -0.34
CCDC40-206ENST00000572083 SH3BGRL3Q9H299 93 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms