RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 CFHR3Q02985 330 aa14.95□□□□□ -0.02
SPNS2-203ENST00000570979 DEFB112Q30KQ8 113 aa14.95□□□□□ -0.02
SPNS2-203ENST00000570979 NIT1Q86X76 327 aa14.95□□□□□ -0.02
SPNS2-203ENST00000570979 LINC00477Q96M19 166 aa14.95□□□□□ -0.02
SPNS2-203ENST00000570979 M0R2Z0 102 aa14.94□□□□□ -0.02
SPNS2-203ENST00000570979 C3orf79P0CE67 100 aa14.94□□□□□ -0.02
SPNS2-203ENST00000570979 RNASEKQ6P5S7 137 aaKnown RBP14.94□□□□□ -0.02
SPNS2-203ENST00000570979 FER1L6-AS1Q8NA97 138 aa14.94□□□□□ -0.02
SPNS2-203ENST00000570979 VAMP3Q15836 100 aa14.93□□□□□ -0.02
SPNS2-203ENST00000570979 LINC01559Q495D7 138 aa14.93□□□□□ -0.02
SPNS2-203ENST00000570979 PEF1Q9UBV8 284 aaKnown RBP14.93□□□□□ -0.02
SPNS2-203ENST00000570979 NTF3P20783 257 aa14.93□□□□□ -0.02
SPNS2-203ENST00000570979 HINT1P49773 126 aaPredicted RBP14.93□□□□□ -0.02
SPNS2-203ENST00000570979 LYZL1Q6UWQ5 148 aa14.93□□□□□ -0.02
SPNS2-203ENST00000570979 RNF114Q9Y508 228 aa14.93□□□□□ -0.02
SPNS2-203ENST00000570979 TENM1Q9UKZ4 2725 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 ORM1P02763 201 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 FOXE3Q13461 319 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 GPHB5Q86YW7 130 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 ST20Q9HBF5 79 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 DAZ1Q9NQZ3 744 aaKnown RBP14.92□□□□□ -0.02
SPNS2-203ENST00000570979 VPREB3Q9UKI3 123 aa14.92□□□□□ -0.02
SPNS2-203ENST00000570979 TRAV8-2A0A0B4J237 113 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 IGHV3-66A0A0C4DH42 116 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 TRBV7-9A0A0J9YWB2 115 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 ZNF207O43670 478 aaKnown RBP14.91□□□□□ -0.02
SPNS2-203ENST00000570979 OR10J6PQ8NGY7 276 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 TPPP3Q9BW30 176 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 UFC1Q9Y3C8 167 aa14.91□□□□□ -0.02
SPNS2-203ENST00000570979 IGLC6P0CF74 106 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 HLA-DMBP28068 263 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 IGFL4Q6B9Z1 124 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 Q6YL49 198 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 CNFNQ9BYD5 112 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 AGPAT4-IT1Q9H0P7 198 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 IGHV7-4-1A0A0J9YVY3 117 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 IGHV4-59P01825 116 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 C12orf54Q6X4T0 127 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 DEFB125Q8N687 156 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 Q8TAT8 98 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 DUX5Q96PT3 197 aa14.9□□□□□ -0.02
SPNS2-203ENST00000570979 ELANEP08246 267 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 PSMB8P28062 276 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 FAM104BQ5XKR9 115 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 RNF182Q8N6D2 247 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 JMJD8Q96S16 334 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 KLK15Q9H2R5 256 aa14.89□□□□□ -0.03
SPNS2-203ENST00000570979 IGHV3OR16-13A0A075B7E8 117 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 IGHV3-74A0A0B4J1X5 117 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 IGHV3-11P01762 117 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 ID1P41134 155 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 ERCC8Q13216 396 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 IGHV3-49A0A0A0MS15 119 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 FAM181BA6NEQ2 426 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 PRAC2D3DTV9 90 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 M0QZ24 198 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 ORMDL3Q8N138 153 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 FAM19A2Q8N3H0 131 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 TMEM191AQ9H0A3 160 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 SMPXQ9UHP9 88 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 HSPB8Q9UJY1 196 aa14.88□□□□□ -0.03
SPNS2-203ENST00000570979 TMSB15BA0A087X1C1 80 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 TAX1BP3O14907 124 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 SCGB1A1P11684 91 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 ZNF80P51504 273 aaPredicted RBP14.87□□□□□ -0.03
SPNS2-203ENST00000570979 TWIST1Q15672 202 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 UNQ9165/PRO28630Q6UXU0 137 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 U3KQK5 164 aa14.87□□□□□ -0.03
SPNS2-203ENST00000570979 RHPN1-AS1Q9BWJ2 59 aa14.86□□□□□ -0.03
SPNS2-203ENST00000570979 DNAJC9-AS1A6NH13 148 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 TRBV12-3P01733 135 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 FA2HQ7L5A8 372 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 PRSS3P2Q8NHM4 247 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 TMEM70Q9BUB7 260 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 AP5S1Q9NUS5 200 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 LEPROTL1O95214 131 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 CACNG7P62955 275 aa14.85□□□□□ -0.03
SPNS2-203ENST00000570979 CRXO43186 299 aaPredicted RBP14.84□□□□□ -0.03
SPNS2-203ENST00000570979 RPL11P62913 178 aaKnown RBP14.84□□□□□ -0.03
SPNS2-203ENST00000570979 SOCS3O14543 225 aa14.83□□□□□ -0.03
SPNS2-203ENST00000570979 Q6ZS46 218 aa14.83□□□□□ -0.03
SPNS2-203ENST00000570979 PRELID3AQ96N28 172 aa14.83□□□□□ -0.03
SPNS2-203ENST00000570979 TRAV21A0A0B4J279 112 aa14.83□□□□□ -0.04
SPNS2-203ENST00000570979 BVES-AS1Q5T3Y7 98 aa14.82□□□□□ -0.04
SPNS2-203ENST00000570979 TMEM86BQ8N661 226 aa14.82□□□□□ -0.04
SPNS2-203ENST00000570979 OR10AG1Q8NH19 301 aa14.82□□□□□ -0.04
SPNS2-203ENST00000570979 MAP1LC3CQ9BXW4 147 aa14.82□□□□□ -0.04
SPNS2-203ENST00000570979 IGHV1-24A0A0C4DH33 117 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 LGALS9O00182 355 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 IGLL1P15814 213 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 CKS2P33552 79 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 URB1-AS1Q96HZ7 61 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 UBE2E2Q96LR5 201 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 NBEAL1Q6ZS30 2694 aa14.81□□□□□ -0.04
SPNS2-203ENST00000570979 TMEM213A2RRL7 107 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 PMCHL2Q9BQD1 86 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 GAGE12BA1L429 117 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 C2orf70A6NJV1 201 aa14.8□□□□□ -0.04
SPNS2-203ENST00000570979 LGALS1P09382 135 aaKnown RBP14.8□□□□□ -0.04
SPNS2-203ENST00000570979 MRPL51Q4U2R6 128 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms