RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MPC2O95563 127 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 CT45A10P0DMU9 189 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 CXCL2P19875 107 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 FGF7P21781 194 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 S100PP25815 95 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 H2BFSP57053 126 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 TAS2R60P59551 318 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 PSG9Q00887 426 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 EWSR1Q01844 656 aaKnown RBP eCLIP2.68□□□□□ -1.98
NUP88-202ENST00000570937 ZNF266Q14584 549 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 DEFB135Q30KP9 77 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 ATRAIDQ6UW56 229 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 LCN15Q6UWW0 184 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 FOXI2Q6ZQN5 318 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 FAM24BQ8N5W8 94 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 INO80EQ8NBZ0 244 aaPredicted RBP2.68□□□□□ -1.98
NUP88-202ENST00000570937 OR11H2Q8NH07 326 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 SLC50A1Q9BRV3 221 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 NPCDR1Q9BY65 106 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 ARV1Q9H2C2 271 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 SLC39A9Q9NUM3 307 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 DOK5Q9P104 306 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 ALG5Q9Y673 324 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 PXMP4Q9Y6I8 212 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 A0A1W2PPV4 95 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TMEM189A5PLL7 270 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 SMIM9A6NGZ8 99 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 PCP4L1A6NKN8 68 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 KNCNA6PVL3 124 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 H3BMM0 161 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 H3BRN7 92 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 S100A8P05109 93 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 STAG3L3P0CL85 134 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 HLA-DRB4P13762 266 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 MIFP14174 115 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 RPL12P30050 165 aaKnown RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 NKX2-5P52952 324 aaPredicted RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 CLINT1Q14677 625 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 ZNF674Q2M3X9 581 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 CASC10Q5T4H9 136 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 PATE2Q6UY27 113 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 ZNF767PQ75MW2 155 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 ZNF738Q8NE65 137 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 OR4B1Q8NGF8 309 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 OR10J6PQ8NGY7 276 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TMEM37Q8WXS4 190 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 C12orf57Q99622 126 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 KIR2DL4Q99706 377 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 MGST2Q99735 147 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 ATP5SQ99766 215 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TCEAL7Q9BRU2 100 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TMEM208Q9BTX3 173 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 SCRT1Q9BWW7 348 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 MRPL32Q9BYC8 188 aaKnown RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 WDR61Q9GZS3 305 aaKnown RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 OR51M1Q9H341 326 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 SAV1Q9H4B6 383 aaPredicted RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 C11orf1Q9H5F2 150 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 EDA2RQ9HAV5 297 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 RETNQ9HD89 108 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TREM1Q9NP99 234 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 OR5AC2Q9NZP5 309 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TMEM14CQ9P0S9 112 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 KLK5Q9Y337 293 aaPredicted RBP2.67□□□□□ -1.98
NUP88-202ENST00000570937 GOLT1BQ9Y3E0 138 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 HSPB11Q9Y547 144 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 TIMM9Q9Y5J7 89 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 HLA-DRB4X5D2U9 266 aa2.67□□□□□ -1.98
NUP88-202ENST00000570937 DNAH9Q9NYC9 4486 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 NBEAL2Q6ZNJ1 2754 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 BORCS7-ASMTA0A0B4J1R7 106 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 A0A0J9YX75 114 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 RAB19A4D1S5 217 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 NUPR2A6NF83 97 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 LINC00587B1AMM8 73 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 MBP02144 154 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 GIPP09681 153 aaPredicted RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 LINC00614P0C842 121 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 HIST1H1EP10412 219 aaKnown RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 CXCL3P19876 107 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 TSPOP30536 169 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 CSN1S1P47710 185 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 CNN1P51911 297 aaKnown RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 TAS2R45P59539 299 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 RHOBP62745 196 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 PDE6HQ13956 83 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 PSG3Q16557 428 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 ACOT6Q3I5F7 207 aaPredicted RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 FAM78BQ5VT40 261 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 MIC13Q5XKP0 118 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 TMEM256Q8N2U0 113 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 OR11H7Q8NGC8 314 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 RPUSD4Q96CM3 377 aaKnown RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 RNF126Q9BV68 326 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 PARD6GQ9BYG4 376 aaPredicted RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 C11orf68Q9H3H3 251 aaKnown RBP2.66□□□□□ -1.98
NUP88-202ENST00000570937 XCL2Q9UBD3 114 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 FUT9Q9Y231 359 aa2.66□□□□□ -1.98
NUP88-202ENST00000570937 DNAH3Q8TD57 4116 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms