RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 IQCF2Q8IXL9 164 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 C6orf223Q8N319 242 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 RASL10AQ92737 203 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 ZNF479Q96JC4 524 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 LINC00479Q96M42 142 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 SPXQ9BT56 116 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 UPK3BQ9BT76 320 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 TMEM167BQ9NRX6 74 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 PRO0255Q9UI72 69 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 EPDR1Q9UM22 224 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 PSG8Q9UQ74 426 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 HHLA3Q9XRX5 114 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 ICOSQ9Y6W8 199 aa3.72□□□□□ -1.81
CHD3-212ENST00000570758 TRAV34A0A0B4J273 112 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 TRGV4A0A0C4DH28 118 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 CTXND1A0A1B0GTU2 59 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 SERTM2A0A1B0GWG4 89 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 M0R2P5 195 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 TAAR5O14804 337 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 GCGP01275 180 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 UBE2G2P60604 165 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 FLI1Q01543 452 aaPredicted RBP3.71□□□□□ -1.82
CHD3-212ENST00000570758 AKR1C8PQ5T2L2 129 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 CYB561D1Q8N8Q1 229 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 TMEM75Q8N9X5 138 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 OR11H4Q8NGC9 324 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 NDFIP1Q9BT67 221 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 KIAA1109Q2LD37 5005 aa3.71□□□□□ -1.82
CHD3-212ENST00000570758 TRAV4A0A0B4J268 109 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 IGKV3D-20A0A0C4DH25 116 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 LOC100131303A0A0U1RQF7 123 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 A0A1W2PRE2 83 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 MAP1LC3B2A6NCE7 125 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 FAM74A7A6NL05 159 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 K7EQM0 130 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 PEX7O00628 323 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 NXPH4O95158 308 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 IFNA7P01567 189 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 GYPEP15421 78 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 FHITP49789 147 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 SLAQ13239 276 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 MRPL23Q16540 153 aaKnown RBP3.7□□□□□ -1.82
CHD3-212ENST00000570758 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 TTC32Q5I0X7 151 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 LYPD5Q6UWN5 251 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 DPPA3Q6W0C5 159 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 KCNRGQ8N5I3 272 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 OR4C5Q8NGB2 326 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 KCNS1Q96KK3 526 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 C9orf85Q96MD7 179 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 MAP1LC3BQ9GZQ8 125 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 ARL2-SNX15V9GYD0 113 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 LRP1BQ9NZR2 4599 aa3.7□□□□□ -1.82
CHD3-212ENST00000570758 RYR1P21817 5038 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 A0A1W2PPQ1 181 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 PGPEP1LA6NFU8 196 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 C9JCJ5 164 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 K7EQD1 137 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 RS1O15537 224 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 PFN1P07737 140 aaKnown RBP3.69□□□□□ -1.82
CHD3-212ENST00000570758 RNASE3P12724 160 aaKnown RBP3.69□□□□□ -1.82
CHD3-212ENST00000570758 GATA1P15976 413 aaPredicted RBP3.69□□□□□ -1.82
CHD3-212ENST00000570758 CRIP1P50238 77 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 LINC00315P59091 139 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 CFAP126Q5VTH2 177 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 Q6ZRN7 208 aaPredicted RBP3.69□□□□□ -1.82
CHD3-212ENST00000570758 NEGR1Q7Z3B1 354 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 Q86TA4 180 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 TNFRSF18Q9Y5U5 241 aa3.69□□□□□ -1.82
CHD3-212ENST00000570758 HSPG2P98160 4391 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 DNAH5Q8TE73 4624 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 IGHV3-73A0A0B4J1V6 119 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 A0A1B0GV50 99 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 FBLL1A6NHQ2 334 aaKnown RBP3.68□□□□□ -1.82
CHD3-212ENST00000570758 HMSDA8MTL9 139 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 FABP5P3A8MUU1 101 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 C16orf90A8MZG2 172 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 SIVA1O15304 175 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 SH2D1AO60880 128 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ORM1P02763 201 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 MED14OSP0DP75 135 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 SRIP30626 198 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 PPT1P50897 306 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ZNF345Q14585 488 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ZNF876PQ49A33 203 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ZFP69Q49AA0 526 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ZNF506Q5JVG8 444 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 SAPCD1Q5SSQ6 148 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 Q6ZSN1 163 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 WFDC10BQ8IUB3 73 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 FAM213BQ8TBF2 198 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
CHD3-212ENST00000570758 MBD3L1Q8WWY6 194 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 HIST1H2BAQ96A08 127 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 PTH2Q96A98 100 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 ZC2HC1AQ96GY0 325 aa3.68□□□□□ -1.82
CHD3-212ENST00000570758 A0A0D9SG52 128 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms