RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 TREM1Q9NP99 234 aa14.38□□□□□ -0.11
RPA1-202ENST00000570451 TRAV21A0A0B4J279 112 aa14.37□□□□□ -0.11
RPA1-202ENST00000570451 G3V3Q6 166 aa14.37□□□□□ -0.11
RPA1-202ENST00000570451 K7EQD1 137 aa14.37□□□□□ -0.11
RPA1-202ENST00000570451 HSD17B11Q8NBQ5 300 aa14.37□□□□□ -0.11
RPA1-202ENST00000570451 ARL14EPLP0DKL9 152 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 CDC34P49427 236 aaPredicted RBP14.36□□□□□ -0.11
RPA1-202ENST00000570451 TDRG1Q3Y452 100 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 Q6ZRN7 208 aaPredicted RBP14.36□□□□□ -0.11
RPA1-202ENST00000570451 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 OR4C5Q8NGB2 326 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 SGK494Q96LW2 274 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 TNFRSF18Q9Y5U5 241 aa14.36□□□□□ -0.11
RPA1-202ENST00000570451 TRAV4A0A0B4J268 109 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 IGHV3-16A0A0C4DH30 117 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 ORM1P02763 201 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 INO80EQ8NBZ0 244 aaPredicted RBP14.35□□□□□ -0.11
RPA1-202ENST00000570451 TVP23CQ96ET8 276 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 SDF2L1Q9HCN8 221 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 LY96Q9Y6Y9 160 aa14.35□□□□□ -0.11
RPA1-202ENST00000570451 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 M0R2P5 195 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 PFDN1O60925 122 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 TYMSP04818 313 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 ARL6IP6Q8N6S5 226 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 NDFIP1Q9BT67 221 aa14.34□□□□□ -0.11
RPA1-202ENST00000570451 C9JCJ5 164 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 EREGO14944 169 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 ARPC5O15511 151 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 ERVFC1-1P60608 527 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 WFDC10BQ8IUB3 73 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 TXNDC17Q9BRA2 123 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 TNFSF18Q9UNG2 199 aa14.33□□□□□ -0.12
RPA1-202ENST00000570451 C1QBP02746 253 aa14.32□□□□□ -0.12
RPA1-202ENST00000570451 FUSP35637 526 aaKnown RBP eCLIP14.32□□□□□ -0.12
RPA1-202ENST00000570451 NFE4Q86UQ8 179 aa14.32□□□□□ -0.12
RPA1-202ENST00000570451 KCNS1Q96KK3 526 aa14.32□□□□□ -0.12
RPA1-202ENST00000570451 AQP10Q96PS8 301 aa14.32□□□□□ -0.12
RPA1-202ENST00000570451 LOC100131303A0A0U1RQF7 123 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 STAG3L2P0CL84 134 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 STAG3L3P0CL85 134 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 ZFP69Q49AA0 526 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 NHLRC2Q8NBF2 726 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 OR11H4Q8NGC9 324 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 OR2G3Q8NGZ4 309 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 RAB24Q969Q5 203 aa14.31□□□□□ -0.12
RPA1-202ENST00000570451 K7EQM0 130 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 EVI2AP22794 236 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 ATP6V0CP27449 155 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 GCHFRP30047 84 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 Q8N1X5 172 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 C5orf17Q8NAS9 161 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 SCRT2Q9NQ03 307 aa14.3□□□□□ -0.12
RPA1-202ENST00000570451 SERTM2A0A1B0GWG4 89 aa14.29□□□□□ -0.12
RPA1-202ENST00000570451 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
RPA1-202ENST00000570451 HMSDA8MTL9 139 aa14.29□□□□□ -0.12
RPA1-202ENST00000570451 TCRAP04437 139 aa14.29□□□□□ -0.12
RPA1-202ENST00000570451 PSMG3Q9BT73 122 aaPredicted RBP14.29□□□□□ -0.12
RPA1-202ENST00000570451 MSRB1Q9NZV6 116 aa14.29□□□□□ -0.12
RPA1-202ENST00000570451 MBP02144 154 aa14.28□□□□□ -0.12
RPA1-202ENST00000570451 DNAH10OSP0CZ25 163 aa14.28□□□□□ -0.12
RPA1-202ENST00000570451 SH3BGRL3Q9H299 93 aa14.28□□□□□ -0.12
RPA1-202ENST00000570451 GCGP01275 180 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 PPT1P50897 306 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 ZNF80P51504 273 aaPredicted RBP14.27□□□□□ -0.13
RPA1-202ENST00000570451 ZNF876PQ49A33 203 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 PGPEP1Q9NXJ5 209 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 C11orf21Q9P2W6 132 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 PSG8Q9UQ74 426 aa14.27□□□□□ -0.13
RPA1-202ENST00000570451 FBLL1A6NHQ2 334 aaKnown RBP14.26□□□□□ -0.13
RPA1-202ENST00000570451 TAAR5O14804 337 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 CXorf1O96002 111 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 CRYGDP07320 174 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 GATA1P15976 413 aaPredicted RBP14.26□□□□□ -0.13
RPA1-202ENST00000570451 SUMO1P63165 101 aaKnown RBP14.26□□□□□ -0.13
RPA1-202ENST00000570451 SERF2P84101 59 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 SH2D6Q7Z4S9 175 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 PRNTQ86SH4 94 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 ACTR3CQ9C0K3 210 aaPredicted RBP14.26□□□□□ -0.13
RPA1-202ENST00000570451 TMEM167BQ9NRX6 74 aa14.26□□□□□ -0.13
RPA1-202ENST00000570451 IGHV3-73A0A0B4J1V6 119 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 GGTLC3B5MD39 225 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 K7EP13 123 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 ZNF345Q14585 488 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 TMEM75Q8N9X5 138 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 SUN5Q8TC36 379 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 EPDR1Q9UM22 224 aa14.25□□□□□ -0.13
RPA1-202ENST00000570451 A0A087WTM6 91 aa14.24□□□□□ -0.13
RPA1-202ENST00000570451 A0A0D9SG52 128 aa14.24□□□□□ -0.13
RPA1-202ENST00000570451 PFN1P07737 140 aaKnown RBP14.24□□□□□ -0.13
RPA1-202ENST00000570451 FLI1Q01543 452 aaPredicted RBP14.24□□□□□ -0.13
RPA1-202ENST00000570451 SMUG1Q53HV7 270 aa14.24□□□□□ -0.13
RPA1-202ENST00000570451 KCNRGQ8N5I3 272 aa14.24□□□□□ -0.13
RPA1-202ENST00000570451 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
RPA1-202ENST00000570451 IGLV2-11P01706 119 aa14.23□□□□□ -0.13
RPA1-202ENST00000570451 CFAP126Q5VTH2 177 aa14.23□□□□□ -0.13
RPA1-202ENST00000570451 CDPF1Q6NVV7 123 aa14.23□□□□□ -0.13
RPA1-202ENST00000570451 C10orf126Q8N4M7 172 aa14.23□□□□□ -0.13
RPA1-202ENST00000570451 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
RPA1-202ENST00000570451 KANTRA0A1W2PQU2 76 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms