RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ORM1P02763 201 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 INO80EQ8NBZ0 244 aaPredicted RBP11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 ZNF479Q96JC4 524 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
MAP1LC3B-208ENST00000570189 HSPG2P98160 4391 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 K7EQD1 137 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 K7EQM0 130 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 NXPH4O95158 308 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 IGLV2-11P01706 119 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TYMSP04818 313 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 GNG5P63218 68 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 Q6ZRN7 208 aaPredicted RBP11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
MAP1LC3B-208ENST00000570189 A0A1W2PRE2 83 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 C16orf90A8MZG2 172 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 GNRH2O43555 120 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 CIDEAO60543 219 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 PTH2Q96A98 100 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
MAP1LC3B-208ENST00000570189 BORCS7-ASMTA0A0B4J1R7 106 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 F6UZH7 168 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 LINC00315P59091 139 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 CYB561D1Q8N8Q1 229 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 EPDR1Q9UM22 224 aa11.67□□□□□ -0.54
MAP1LC3B-208ENST00000570189 C9JCJ5 164 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 G3V3Q6 166 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TAAR5O14804 337 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SRIP30626 198 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TIRAPP58753 221 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 FLI1Q01543 452 aaPredicted RBP11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 OR4C5Q8NGB2 326 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 TXNDC17Q9BRA2 123 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 PSG8Q9UQ74 426 aa11.66□□□□□ -0.54
MAP1LC3B-208ENST00000570189 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 SAPCD1Q5SSQ6 148 aa11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 OR2T35Q8NGX2 323 aa11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 PCNPQ8WW12 178 aaKnown RBP11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 C9orf85Q96MD7 179 aa11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 NKX6-2Q9C056 277 aaPredicted RBP11.65□□□□□ -0.54
MAP1LC3B-208ENST00000570189 FXYD6-FXYD2A0A087WZ82 144 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 GCGP01275 180 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 GYPEP15421 78 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 ZNF726P1Q15940 193 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 C11orf21Q9P2W6 132 aa11.64□□□□□ -0.55
MAP1LC3B-208ENST00000570189 DNAH5Q8TE73 4624 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 DNAH10OSP0CZ25 163 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 RGS21Q2M5E4 152 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 ZFP69Q49AA0 526 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 SPATA12Q7Z6I5 190 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 NFE4Q86UQ8 179 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
MAP1LC3B-208ENST00000570189 TRAV9-2A0A087WT02 112 aa11.62□□□□□ -0.55
MAP1LC3B-208ENST00000570189 LY96Q9Y6Y9 160 aa11.62□□□□□ -0.55
MAP1LC3B-208ENST00000570189 APOBP04114 4563 aaKnown RBP11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 RS1O15537 224 aa11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 ZNF876PQ49A33 203 aa11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 COX8CQ7Z4L0 72 aa11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 ABCA13Q86UQ4 5058 aa11.61□□□□□ -0.55
MAP1LC3B-208ENST00000570189 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 RNASE3P12724 160 aaKnown RBP11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 CFAP126Q5VTH2 177 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 PRNTQ86SH4 94 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 HIST1H2BAQ96A08 127 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 CYTL1Q9NRR1 136 aa11.6□□□□□ -0.55
MAP1LC3B-208ENST00000570189 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 PPT1P50897 306 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 AKR1C8PQ5T2L2 129 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 DPPA3Q6W0C5 159 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
MAP1LC3B-208ENST00000570189 EVI2AP22794 236 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 FHITP49789 147 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 ZNF345Q14585 488 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 RHOHQ15669 191 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 ZNF506Q5JVG8 444 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 DNLZQ5SXM8 178 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 SLC25A29Q8N8R3 303 aa11.58□□□□□ -0.56
MAP1LC3B-208ENST00000570189 LOC100131303A0A0U1RQF7 123 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms