RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CKS2P33552 79 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 C5orf56Q8N8D9 126 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 EEF1AKMT3Q96AZ1 226 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 ZFAND3Q9H8U3 227 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 TRAV41A0A0B4J266 112 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 EVI2AP22794 236 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 MAPK1IP1LQ8NDC0 245 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 METTL26Q96S19 204 aa6.75□□□□□ -1.33
LINC00558-201ENST00000569422 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
LINC00558-201ENST00000569422 DGAT2L7PQ6IED9 249 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 IGHV4-30-2A0A087WSY4 118 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 CLPSL1A2RUU4 121 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 H3BUX3 64 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 SRD5A1P18405 259 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 BLCAPP62952 87 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 Q6ZS46 218 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 C16orf92Q96LL3 132 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 C18orf15Q96N68 181 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 IGSF10Q6WRI0 2623 aa6.74□□□□□ -1.33
LINC00558-201ENST00000569422 J3QLI3 93 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 FAM104BQ5XKR9 115 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 DOPEY2Q9Y3R5 2298 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 CREBBPQ92793 2442 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 FABP5P3A8MUU1 101 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 GATA1P15976 413 aaPredicted RBP6.73□□□□□ -1.33
LINC00558-201ENST00000569422 UNQ9165/PRO28630Q6UXU0 137 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 ORMDL3Q8N138 153 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 AGPAT4-IT1Q9H0P7 198 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 KLK15Q9H2R5 256 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 A0A087WX48 190 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 IGHV1-69DA0A0B4J2H0 117 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 NPYP01303 97 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 IGHV1-69P01742 117 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 IGF1P05019 195 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 PAX8Q06710 450 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 Q6AWC8 147 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 C8orf86Q6ZUL3 223 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 OR10AG1Q8NH19 301 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 MOB4Q9Y3A3 225 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 COX11Q9Y6N1 276 aa6.73□□□□□ -1.33
LINC00558-201ENST00000569422 ABCA2Q9BZC7 2435 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 GAGE10A6NGK3 116 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 TMEM78Q5T7P6 136 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 LRRK2Q5S007 2527 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 CUBNO60494 3623 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 PIFOQ8TCI5 191 aa6.72□□□□□ -1.33
LINC00558-201ENST00000569422 PRB1P04280 392 aa6.71□□□□□ -1.33
LINC00558-201ENST00000569422 BAALCQ8WXS3 180 aa6.71□□□□□ -1.33
LINC00558-201ENST00000569422 C11orf21Q9P2W6 132 aa6.71□□□□□ -1.33
LINC00558-201ENST00000569422 TRBV7-1A0A0A6YYK4 115 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 TRAV8-2A0A0B4J237 113 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 TRAV26-2A0A0B4J265 109 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 MPV17L2Q567V2 206 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 V9GYY9 64 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 ZNF462Q96JM2 2506 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 A1L4Q6 167 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 F6UB75 175 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 CACNG7P62955 275 aa6.71□□□□□ -1.34
LINC00558-201ENST00000569422 ZANQ9Y493 2812 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 A0A087X0K7 114 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 IGKV3D-20A0A0C4DH25 116 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 NUDT3O95989 172 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 ERG28Q9UKR5 140 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 AVPP01185 164 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 SLC25A34Q6PIV7 304 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 ZNF575Q86XF7 245 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 DEFB104AQ8WTQ1 72 aa6.7□□□□□ -1.34
LINC00558-201ENST00000569422 ABCA12Q86UK0 2595 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 A0A096LNJ9 63 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 C10orf105Q8TEF2 133 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 C20orf173Q96LM9 149 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 GTSF1LQ9H1H1 148 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 H3BVH4 76 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 CRXO43186 299 aaPredicted RBP6.69□□□□□ -1.34
LINC00558-201ENST00000569422 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 SPANXN1Q5VSR9 72 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 PTPN13Q12923 2485 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 B5MCH6 92 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 KIR3DS1Q14943 382 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
LINC00558-201ENST00000569422 M0R381 172 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 HIST1H1AQ02539 215 aaPredicted RBP6.68□□□□□ -1.34
LINC00558-201ENST00000569422 PRR9Q5T870 116 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 C10orf99Q6UWK7 81 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 STHQ8IWL8 128 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 OR4X2Q8NGF9 303 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 MSMBP08118 114 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 LEPP41159 167 aa6.68□□□□□ -1.34
LINC00558-201ENST00000569422 RNF185Q96GF1 192 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms