RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SDF2L1Q9HCN8 221 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 X6R8D5 127 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 TRGV11A0A075B6L2 103 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
USB1-215ENST00000569252 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
USB1-215ENST00000569252 EMP1P54849 157 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
USB1-215ENST00000569252 TMEM241Q24JQ0 296 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 COMMD7Q86VX2 200 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 MLST8Q9BVC4 326 aa11.58□□□□□ -0.56
USB1-215ENST00000569252 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
USB1-215ENST00000569252 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
USB1-215ENST00000569252 OR5I1Q13606 314 aa11.57□□□□□ -0.56
USB1-215ENST00000569252 ANXA2RQ3ZCQ2 193 aa11.57□□□□□ -0.56
USB1-215ENST00000569252 TMEM263Q8WUH6 116 aaKnown RBP11.57□□□□□ -0.56
USB1-215ENST00000569252 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
USB1-215ENST00000569252 SH2D1AO60880 128 aa11.56□□□□□ -0.56
USB1-215ENST00000569252 OCC1Q8TAD7 63 aa11.56□□□□□ -0.56
USB1-215ENST00000569252 LY96Q9Y6Y9 160 aa11.56□□□□□ -0.56
USB1-215ENST00000569252 A0A0J9YWU9 116 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 B4DEV8 164 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 C9JQL5 133 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 DEFB4AO15263 64 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 PRM2P04554 102 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 SFTA3P0C7M3 94 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 AZU1P20160 251 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 S100A4P26447 101 aaKnown RBP11.55□□□□□ -0.56
USB1-215ENST00000569252 CRIP1P50238 77 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 Q6ZQT7 251 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 Q8NAQ8 132 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 TIMM8BQ9Y5J9 83 aaPredicted RBP11.55□□□□□ -0.56
USB1-215ENST00000569252 ALMS1Q8TCU4 4167 aa11.55□□□□□ -0.56
USB1-215ENST00000569252 PGPEP1LA6NFU8 196 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 M0R036 132 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 P01737 135 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 C11orf68Q9H3H3 251 aaKnown RBP11.54□□□□□ -0.56
USB1-215ENST00000569252 NAT8Q9UHE5 227 aa11.54□□□□□ -0.56
USB1-215ENST00000569252 TRBV20OR9-2A0A075B6H5 130 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 TEX48A0A1B0GUV7 120 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 XKRY2A2RUG3 117 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 CXorf65A6NEN9 183 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 GNRH2O43555 120 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 IGLV2-8P01709 118 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 ERVFC1-1P60608 527 aa11.53□□□□□ -0.56
USB1-215ENST00000569252 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
USB1-215ENST00000569252 TMSB15BA0A087X1C1 80 aa11.52□□□□□ -0.57
USB1-215ENST00000569252 ASIPP42127 132 aa11.52□□□□□ -0.57
USB1-215ENST00000569252 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.57
USB1-215ENST00000569252 RNASE8Q8TDE3 154 aaKnown RBP11.52□□□□□ -0.57
USB1-215ENST00000569252 GSN-AS1Q9NRJ2 163 aa11.52□□□□□ -0.57
USB1-215ENST00000569252 TP53TG3Q9ULZ0 132 aa11.52□□□□□ -0.57
USB1-215ENST00000569252 LYRM9A8MSI8 78 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 KRBOX1C9JBD0 128 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 F8W036 122 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 TYMSP04818 313 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 ADIRFQ15847 76 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 C15orf54Q8N8G6 183 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 IL17DQ8TAD2 202 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 SPXQ9BT56 116 aa11.51□□□□□ -0.57
USB1-215ENST00000569252 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
USB1-215ENST00000569252 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
USB1-215ENST00000569252 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
USB1-215ENST00000569252 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
USB1-215ENST00000569252 OR2D3Q8NGH3 330 aa11.5□□□□□ -0.57
USB1-215ENST00000569252 MDFICQ9P1T7 246 aa11.5□□□□□ -0.57
USB1-215ENST00000569252 C11orf21Q9P2W6 132 aa11.5□□□□□ -0.57
USB1-215ENST00000569252 IGHV3-16A0A0C4DH30 117 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 GRIFINA4D1Z8 144 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 K7EN84 100 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 TCL1AP56279 114 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 DAZ2Q13117 558 aaKnown RBP11.49□□□□□ -0.57
USB1-215ENST00000569252 FAM222AQ5U5X8 452 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 NUDT10Q8NFP7 164 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 NUDT11Q96G61 164 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 EDA2RQ9HAV5 297 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 FRAS1Q86XX4 4008 aa11.49□□□□□ -0.57
USB1-215ENST00000569252 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
USB1-215ENST00000569252 DAD1P61803 113 aa11.48□□□□□ -0.57
USB1-215ENST00000569252 RPL23P62829 140 aaKnown RBP11.48□□□□□ -0.57
USB1-215ENST00000569252 PNRC1Q12796 327 aaPredicted RBP11.48□□□□□ -0.57
USB1-215ENST00000569252 NDUFA5Q16718 116 aa11.48□□□□□ -0.57
USB1-215ENST00000569252 FAM231DQ6ZW35 169 aa11.48□□□□□ -0.57
USB1-215ENST00000569252 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
USB1-215ENST00000569252 DKK2Q9UBU2 259 aa11.48□□□□□ -0.57
USB1-215ENST00000569252 TRGV1A0A0A0MS02 117 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 DEFB130BP0DP73 79 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 DEFB130AP0DP74 79 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 LGALS9BQ3B8N2 356 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 C11orf72Q8NBR9 251 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
USB1-215ENST00000569252 PHLDA3Q9Y5J5 127 aa11.47□□□□□ -0.57
USB1-215ENST00000569252 TRGV2A0A075B6R0 118 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms