RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, human

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA3-206	ENST00000569062	CRYBA4	P53673	196 aa		13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	FGF8	P55075	233 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	ZNF479	Q96JC4	524 aa		13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	NDFIP1	Q9BT67	221 aa		13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	PRO0255	Q9UI72	69 aa		13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	HHLA3	Q9XRX5	114 aa		13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062	MRPS16	Q9Y3D3	137 aa	Known RBP	13.9	□□□□□ -0.18
ABCA3-206	ENST00000569062		A0A1W2PRE2	83 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	FLI1	Q01543	452 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	AKR1C8P	Q5T2L2	129 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	PRNT	Q86SH4	94 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	C6orf223	Q8N319	242 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	CYB561D1	Q8N8Q1	229 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	KRTAP1-5	Q9BYS1	174 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	SDF2L1	Q9HCN8	221 aa		13.89	□□□□□ -0.19
ABCA3-206	ENST00000569062	GCG	P01275	180 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	UBE2G2	P60604	165 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	TMEM75	Q8N9X5	138 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	C11orf21	Q9P2W6	132 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	ICOS	Q9Y6W8	199 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	HERC2	O95714	4834 aa		13.88	□□□□□ -0.19
ABCA3-206	ENST00000569062	TRGV4	A0A0C4DH28	118 aa		13.87	□□□□□ -0.19
ABCA3-206	ENST00000569062	SLA	Q13239	276 aa		13.87	□□□□□ -0.19
ABCA3-206	ENST00000569062	KCNS1	Q96KK3	526 aa		13.87	□□□□□ -0.19
ABCA3-206	ENST00000569062	LINC00479	Q96M42	142 aa		13.87	□□□□□ -0.19
ABCA3-206	ENST00000569062	DYNC1H1	Q14204	4646 aa	Known RBP	13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062	TRAV34	A0A0B4J273	112 aa		13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062		M0R2P5	195 aa		13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062	TNP2	Q05952	138 aa		13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062	OR11H4	Q8NGC9	324 aa		13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062	KIAA1109	Q2LD37	5005 aa		13.86	□□□□□ -0.19
ABCA3-206	ENST00000569062	DNAH11	Q96DT5	4516 aa		13.85	□□□□□ -0.19
ABCA3-206	ENST00000569062	PFN1	P07737	140 aa	Known RBP	13.85	□□□□□ -0.19
ABCA3-206	ENST00000569062	SMUG1	Q53HV7	270 aa		13.85	□□□□□ -0.19
ABCA3-206	ENST00000569062	KCNRG	Q8N5I3	272 aa		13.85	□□□□□ -0.19
ABCA3-206	ENST00000569062	TRAV4	A0A0B4J268	109 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	MAP1LC3B2	A6NCE7	125 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	FAM74A7	A6NL05	159 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	IFNA7	P01567	189 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	ZNF345	Q14585	488 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	ZFP69	Q49AA0	526 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	MAP1LC3B	Q9GZQ8	125 aa		13.84	□□□□□ -0.19
ABCA3-206	ENST00000569062	FBLL1	A6NHQ2	334 aa	Known RBP	13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	FHIT	P49789	147 aa		13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	MRPL23	Q16540	153 aa	Known RBP	13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	TTC32	Q5I0X7	151 aa		13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	SAPCD1	Q5SSQ6	148 aa		13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	OR4C5	Q8NGB2	326 aa		13.83	□□□□□ -0.2
ABCA3-206	ENST00000569062	HMSD	A8MTL9	139 aa		13.82	□□□□□ -0.2
ABCA3-206	ENST00000569062		K7EQD1	137 aa		13.82	□□□□□ -0.2
ABCA3-206	ENST00000569062	PEX7	O00628	323 aa		13.82	□□□□□ -0.2
ABCA3-206	ENST00000569062	LYPD5	Q6UWN5	251 aa		13.82	□□□□□ -0.2
ABCA3-206	ENST00000569062	ARL2-SNX15	V9GYD0	113 aa		13.82	□□□□□ -0.2
ABCA3-206	ENST00000569062		C9JCJ5	164 aa		13.81	□□□□□ -0.2
ABCA3-206	ENST00000569062	GYPE	P15421	78 aa		13.81	□□□□□ -0.2
ABCA3-206	ENST00000569062	NEGR1	Q7Z3B1	354 aa		13.81	□□□□□ -0.2
ABCA3-206	ENST00000569062		A0A1W2PPQ1	181 aa		13.8	□□□□□ -0.2
ABCA3-206	ENST00000569062	SIVA1	O15304	175 aa		13.8	□□□□□ -0.2
ABCA3-206	ENST00000569062	NXPH4	O95158	308 aa		13.8	□□□□□ -0.2
ABCA3-206	ENST00000569062	C9orf85	Q96MD7	179 aa		13.8	□□□□□ -0.2
ABCA3-206	ENST00000569062	NKX6-2	Q9C056	277 aa	Predicted RBP	13.8	□□□□□ -0.2
ABCA3-206	ENST00000569062	LOC100131303	A0A0U1RQF7	123 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	RNASE3	P12724	160 aa	Known RBP	13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	SRI	P30626	198 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	PPT1	P50897	306 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	ZNF876P	Q49A33	203 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	DPPA3	Q6W0C5	159 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062		Q86TA4	180 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	ZNF575	Q86XF7	245 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	HIST1H2BA	Q96A08	127 aa		13.79	□□□□□ -0.2
ABCA3-206	ENST00000569062	IGKV3D-20	A0A0C4DH25	116 aa		13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062		A0A0D9SG52	128 aa		13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062	ORM1	P02763	201 aa		13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062	SEC11B	P0C7V7	166 aa		13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062	PCNP	Q8WW12	178 aa	Known RBP	13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062	ZNF471	Q9BX82	626 aa	Predicted RBP	13.78	□□□□□ -0.2
ABCA3-206	ENST00000569062	KANTR	A0A1W2PQU2	76 aa		13.77	□□□□□ -0.21
ABCA3-206	ENST00000569062	PGPEP1L	A6NFU8	196 aa		13.77	□□□□□ -0.21
ABCA3-206	ENST00000569062	BCL2L11	O43521	198 aa		13.77	□□□□□ -0.21
ABCA3-206	ENST00000569062	STOML3	Q8TAV4	291 aa		13.77	□□□□□ -0.21
ABCA3-206	ENST00000569062	FABP5P3	A8MUU1	101 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	RS1	O15537	224 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	GATA1	P15976	413 aa	Predicted RBP	13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	CRIP1	P50238	77 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	ZNF506	Q5JVG8	444 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	CFAP126	Q5VTH2	177 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	CST9LP1	Q5W188	147 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	FAM213B	Q8TBF2	198 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062	ZC2HC1A	Q96GY0	325 aa		13.76	□□□□□ -0.21
ABCA3-206	ENST00000569062		A0A1B0GV50	99 aa		13.75	□□□□□ -0.21
ABCA3-206	ENST00000569062	MED14OS	P0DP75	135 aa		13.75	□□□□□ -0.21
ABCA3-206	ENST00000569062	LINC00315	P59091	139 aa		13.75	□□□□□ -0.21
ABCA3-206	ENST00000569062	SFT2D1	Q8WV19	159 aa		13.75	□□□□□ -0.21
ABCA3-206	ENST00000569062	IGHV3-73	A0A0B4J1V6	119 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	UMAD1	C9J7I0	102 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	PAGE4	O60829	102 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	UBE2G1	P62253	170 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	TMUB2	Q71RG4	321 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	MBD3L1	Q8WWY6	194 aa		13.74	□□□□□ -0.21
ABCA3-206	ENST00000569062	FMC1	Q96HJ9	113 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms