RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	LY96	Q9Y6Y9	160 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	LYRM9	A8MSI8	78 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499		B4DEV8	164 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	PRM2	P04554	102 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SRSF3	P84103	164 aa	Known RBP	10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	OR5I1	Q13606	314 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	UQCC3	Q6UW78	93 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499		Q6ZQT7	251 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	WWC2-AS2	Q96NR7	200 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	EDA2R	Q9HAV5	297 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	DNAH9	Q9NYC9	4486 aa		10.71	□□□□□ -0.69
KLHDC4-223	ENST00000568499	S100A4	P26447	101 aa	Known RBP	10.7	□□□□□ -0.7
KLHDC4-223	ENST00000568499	CRIP1	P50238	77 aa		10.7	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TMEM241	Q24JQ0	296 aa		10.7	□□□□□ -0.7
KLHDC4-223	ENST00000568499	OCC1	Q8TAD7	63 aa		10.7	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TRBV20OR9-2	A0A075B6H5	130 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	XKRY2	A2RUG3	117 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499		M0R036	132 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	IGLV2-8	P01709	118 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499		P01737	135 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TYMS	P04818	313 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TCL1A	P56279	114 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	DAZ2	Q13117	558 aa	Known RBP	10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	FAM222A	Q5U5X8	452 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	SPX	Q9BT56	116 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	NOP10	Q9NPE3	64 aa	Known RBP	10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	GSN-AS1	Q9NRJ2	163 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	DKK2	Q9UBU2	259 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TP53TG3	Q9ULZ0	132 aa		10.69	□□□□□ -0.7
KLHDC4-223	ENST00000568499	PGPEP1L	A6NFU8	196 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	KRBOX1	C9JBD0	128 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499		C9JQL5	133 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	GNRH2	O43555	120 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	ASIP	P42127	132 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	LINC01559	Q495D7	138 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	COMMD7	Q86VX2	200 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	C11orf21	Q9P2W6	132 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	NAT8	Q9UHE5	227 aa		10.68	□□□□□ -0.7
KLHDC4-223	ENST00000568499	IGKV3D-20	A0A0C4DH25	116 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	IGHV3-16	A0A0C4DH30	117 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	LINC00862	A6NCI5	91 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	SFTA3	P0C7M3	94 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	RPS20	P60866	119 aa	Known RBP	10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	DAD1	P61803	113 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	C11orf72	Q8NBR9	251 aa		10.67	□□□□□ -0.7
KLHDC4-223	ENST00000568499	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	COL7A1	Q02388	2944 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TMSB15B	A0A087X1C1	80 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	PLAC8L1	A1L4L8	177 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	LGALS9B	Q3B8N2	356 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	MDFIC	Q9P1T7	246 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TENM3	Q9P273	2699 aa		10.66	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TG	P01266	2768 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	TRGV1	A0A0A0MS02	117 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	C19orf71	A6NCJ1	209 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499		M0R2P5	195 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	CXCL1	P09341	107 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	DEFB130B	P0DP73	79 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	DEFB130A	P0DP74	79 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	ERVFC1-1	P60608	527 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	LINC01551	Q86U37	167 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	OR2D3	Q8NGH3	330 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	CELA1	Q9UNI1	258 aa		10.65	□□□□□ -0.7
KLHDC4-223	ENST00000568499	STAB2	Q8WWQ8	2551 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	TRGV2	A0A075B6R0	118 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499		K7EN84	100 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	SPINK4	O60575	86 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	NANOS2	P60321	138 aa	Known RBP	10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	ADIRF	Q15847	76 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	DNLZ	Q5SXM8	178 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	FAM231D	Q6ZW35	169 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	C15orf54	Q8N8G6	183 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	NUDT10	Q8NFP7	164 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	NUDT11	Q96G61	164 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	IL36B	Q9NZH7	164 aa		10.64	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GAGE12B	A1L429	117 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GRIFIN	A4D1Z8	144 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GATC	O43716	136 aa	Known RBP	10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GAGE7	O76087	117 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GAGE12F	P0CL80	117 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GAGE12G	P0CL81	117 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	GAGE12I	P0CL82	117 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	C12orf74	Q32Q52	190 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	SYT8	Q8NBV8	401 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	MUC7	Q8TAX7	377 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	RNASE7	Q9H1E1	156 aa	Known RBP	10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	RPP21	Q9H633	154 aa	Known RBP	10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	PHLDA3	Q9Y5J5	127 aa		10.63	□□□□□ -0.71
KLHDC4-223	ENST00000568499	TMEM218	A2RU14	115 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499		H3BVH4	76 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	ARMS2	P0C7Q2	107 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	MED14OS	P0DP75	135 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	RPL23	P62829	140 aa	Known RBP	10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	RPL19	P84098	196 aa	Known RBP	10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	PNRC1	Q12796	327 aa	Predicted RBP	10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	C9orf85	Q96MD7	179 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	NDUFAF3	Q9BU61	184 aa		10.62	□□□□□ -0.71
KLHDC4-223	ENST00000568499	TRAV10	A0A0B4J240	114 aa		10.61	□□□□□ -0.71
KLHDC4-223	ENST00000568499		F8W036	122 aa		10.61	□□□□□ -0.71
KLHDC4-223	ENST00000568499	ATP5G1	P05496	136 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms