RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 MAP1LC3BQ9GZQ8 125 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 TMEM167BQ9NRX6 74 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
SF3B3-211ENST00000568291 A0A096LPF7 62 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 TRBV7-9A0A0J9YWB2 115 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 HMSDA8MTL9 139 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 BCL2L11O43521 198 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 GCGP01275 180 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 FLI1Q01543 452 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-211ENST00000568291 Q6ZR54 194 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 FAM213BQ8TBF2 198 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 TMED6Q8WW62 240 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 LINC00588Q9Y4M8 146 aa6.61□□□□□ -1.35
SF3B3-211ENST00000568291 RYR1P21817 5038 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 IGHV3-16A0A0C4DH30 117 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 A0A0D9SG52 128 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 KANTRA0A1W2PQU2 76 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 FAM74A7A6NL05 159 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 PFDN1O60925 122 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 TYMSP04818 313 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF415Q09FC8 603 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF345Q14585 488 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 LGALSLQ3ZCW2 172 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-211ENST00000568291 SOHLH1Q5JUK2 328 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 IBA57Q5T440 356 aaKnown RBP6.6□□□□□ -1.35
SF3B3-211ENST00000568291 CST9LP1Q5W188 147 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 Q6ZNX1 250 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 CYB561D1Q8N8Q1 229 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 SFT2D1Q8WV19 159 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 ZNF479Q96JC4 524 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
SF3B3-211ENST00000568291 DNAH17Q9UFH2 4485 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 TRAV21A0A0B4J279 112 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 C9JCJ5 164 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 PEX7O00628 323 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 PAGE4O60829 102 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 CCL20P78556 96 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 FHL2Q14192 279 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 ESRGQ1W209 222 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 ARL2-SNX15V9GYD0 113 aa6.59□□□□□ -1.35
SF3B3-211ENST00000568291 TRGV11A0A075B6L2 103 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 A0A1B0GVG6 124 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 K7EQM0 130 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 RNF212Q495C1 297 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 ARL6IP6Q8N6S5 226 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 NHLRC2Q8NBF2 726 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 ZNRF2Q8NHG8 242 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 NDFIP1Q9BT67 221 aa6.58□□□□□ -1.36
SF3B3-211ENST00000568291 IGHV3-73A0A0B4J1V6 119 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 TRGV4A0A0C4DH28 118 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 PAX4O43316 350 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 CRIP1P50238 77 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 CCL18P55774 89 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 TDRG1Q3Y452 100 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 C1orf134Q5TEV5 83 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 DPPA3Q6W0C5 159 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 SDF2L1Q9HCN8 221 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 HHLA3Q9XRX5 114 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 DNAH11Q96DT5 4516 aa6.57□□□□□ -1.36
SF3B3-211ENST00000568291 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 TMSB15BA0A087X1C1 80 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 IGKV3D-20A0A0C4DH25 116 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 GRIFINA4D1Z8 144 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 M0R036 132 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 PFN1P07737 140 aaKnown RBP6.56□□□□□ -1.36
SF3B3-211ENST00000568291 H2AFB1P0C5Y9 115 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 TPT1P13693 172 aaKnown RBP6.56□□□□□ -1.36
SF3B3-211ENST00000568291 CRYBA4P53673 196 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 Q86TA4 180 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 STOML3Q8TAV4 291 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 MBD3L1Q8WWY6 194 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 RASL10AQ92737 203 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 ZC2HC1AQ96GY0 325 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 SPXQ9BT56 116 aa6.56□□□□□ -1.36
SF3B3-211ENST00000568291 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 PGPEP1LA6NFU8 196 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 UMAD1C9J7I0 102 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 M0R2P5 195 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 ORM1P02763 201 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
SF3B3-211ENST00000568291 UBE2G1P62253 170 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 ZFP69Q49AA0 526 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 SAPCD1Q5SSQ6 148 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 OR4C5Q8NGB2 326 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 KCNS1Q96KK3 526 aa6.55□□□□□ -1.36
SF3B3-211ENST00000568291 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms