RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ZNF738Q8NE65 137 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 CMTM2Q8TAZ6 248 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
CAPN3-216ENST00000567071 IGHV3OR16-12A0A075B7B8 117 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 F6UB75 175 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 F6UZH7 168 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 PEX7O00628 323 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 SRP19P09132 144 aaKnown RBP6.71□□□□□ -1.34
CAPN3-216ENST00000567071 AKR1C3P42330 323 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 CSN1S1P47710 185 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
CAPN3-216ENST00000567071 PSG3Q16557 428 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 CCDC28AQ8IWP9 274 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 CYB561D1Q8N8Q1 229 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 RPUSD4Q96CM3 377 aaKnown RBP6.71□□□□□ -1.34
CAPN3-216ENST00000567071 DERL1Q9BUN8 251 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 NKX6-2Q9C056 277 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-216ENST00000567071 EPDR1Q9UM22 224 aa6.71□□□□□ -1.34
CAPN3-216ENST00000567071 TRAV34A0A0B4J273 112 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 DIRC3C9JPN6 131 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 PDE6DO43924 150 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 TCRAP04437 139 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 ZNF705DP0CH99 300 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-216ENST00000567071 ZNF705BP0CI00 300 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-216ENST00000567071 ZNF674Q2M3X9 581 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 GOLT1AQ6ZVE7 132 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 MRPL53Q96EL3 112 aaKnown RBP6.7□□□□□ -1.34
CAPN3-216ENST00000567071 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 TXNDC17Q9BRA2 123 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 PRELID1Q9Y255 219 aa6.7□□□□□ -1.34
CAPN3-216ENST00000567071 TRAV8-1A0A0A6YYK1 113 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 F5H768 121 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 SFTA3P0C7M3 94 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 CNN1P51911 297 aaKnown RBP6.69□□□□□ -1.34
CAPN3-216ENST00000567071 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-216ENST00000567071 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 GDF5OSQ5U4N7 250 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 UQCC3Q6UW78 93 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 ZNF705AQ6ZN79 300 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-216ENST00000567071 Q6ZRN7 208 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-216ENST00000567071 Q8TAT8 98 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 HIST1H2BAQ96A08 127 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 LINC00479Q96M42 142 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 VGLL1Q99990 258 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 TCEAL7Q9BRU2 100 aa6.69□□□□□ -1.34
CAPN3-216ENST00000567071 A0A087WTM6 91 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 TMEM250H0YL14 139 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 K7EQM0 130 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 RPL35P42766 123 aaKnown RBP6.68□□□□□ -1.34
CAPN3-216ENST00000567071 UBE2G1P62253 170 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 ERCC8Q13216 396 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 NFE4Q86UQ8 179 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 EIF4E3Q8N5X7 224 aaKnown RBP6.68□□□□□ -1.34
CAPN3-216ENST00000567071 OR8A1Q8NGG7 326 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 SMIM7Q9BQ49 75 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 SLC35B3Q9H1N7 401 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 PARLQ9H300 379 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 SMDT1Q9H4I9 107 aa6.68□□□□□ -1.34
CAPN3-216ENST00000567071 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 PGPEP1LA6NFU8 196 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 ZNF727A8MUV8 499 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 RS1O15537 224 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 ADCYAP1P18509 176 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 CENPWQ5EE01 88 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 EBLN2Q6P2I7 272 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 PRNTQ86SH4 94 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 Q86TA4 180 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 NHLRC2Q8NBF2 726 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
CAPN3-216ENST00000567071 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 A0A0J9YX75 114 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 SERTM2A0A1B0GWG4 89 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 TMEM218A2RU14 115 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 F8W036 122 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 NDUFS6O75380 124 aaKnown RBP6.66□□□□□ -1.34
CAPN3-216ENST00000567071 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 IGLV2-11P01706 119 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 FLI1Q01543 452 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-216ENST00000567071 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 TMEM78Q5T7P6 136 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 FOXI2Q6ZQN5 318 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 ARL6IP6Q8N6S5 226 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 TMEM75Q8N9X5 138 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 OR4B1Q8NGF8 309 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 IGF2BP2-AS1Q96M15 143 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 AGPAT4-IT1Q9H0P7 198 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 SAV1Q9H4B6 383 aaPredicted RBP6.66□□□□□ -1.34
CAPN3-216ENST00000567071 PSG8Q9UQ74 426 aa6.66□□□□□ -1.34
CAPN3-216ENST00000567071 RBAKDNA6NC62 111 aa6.65□□□□□ -1.34
CAPN3-216ENST00000567071 J3KRW8 73 aa6.65□□□□□ -1.34
CAPN3-216ENST00000567071 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
CAPN3-216ENST00000567071 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
CAPN3-216ENST00000567071 GNG4P50150 75 aa6.65□□□□□ -1.34
CAPN3-216ENST00000567071 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms