RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 HYLS1Q96M11 299 aa9.77□□□□□ -0.85
COMMD4-216ENST00000567023 SPXQ9BT56 116 aa9.77□□□□□ -0.85
COMMD4-216ENST00000567023 SIVA1O15304 175 aa9.76□□□□□ -0.85
COMMD4-216ENST00000567023 IGHV3-53P01767 116 aa9.76□□□□□ -0.85
COMMD4-216ENST00000567023 GCHFRP30047 84 aa9.76□□□□□ -0.85
COMMD4-216ENST00000567023 MRPL23Q16540 153 aaKnown RBP9.76□□□□□ -0.85
COMMD4-216ENST00000567023 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
COMMD4-216ENST00000567023 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
COMMD4-216ENST00000567023 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 CTXND1A0A1B0GTU2 59 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 CXorf1O96002 111 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
COMMD4-216ENST00000567023 NEGR1Q7Z3B1 354 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 TMEM167BQ9NRX6 74 aa9.75□□□□□ -0.85
COMMD4-216ENST00000567023 KANTRA0A1W2PQU2 76 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 NXPH4O95158 308 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 SEC11BP0C7V7 166 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 LINC00315P59091 139 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 TVP23CQ96ET8 276 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 ZNF479Q96JC4 524 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 C8orf49Q96NF6 230 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 ZNF471Q9BX82 626 aaPredicted RBP9.74□□□□□ -0.85
COMMD4-216ENST00000567023 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
COMMD4-216ENST00000567023 TRAV21A0A0B4J279 112 aa9.73□□□□□ -0.85
COMMD4-216ENST00000567023 TRGV4A0A0C4DH28 118 aa9.73□□□□□ -0.85
COMMD4-216ENST00000567023 K7EQD1 137 aa9.73□□□□□ -0.85
COMMD4-216ENST00000567023 C1QBP02746 253 aa9.73□□□□□ -0.85
COMMD4-216ENST00000567023 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
COMMD4-216ENST00000567023 TRAV8-1A0A0A6YYK1 113 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 SERTM2A0A1B0GWG4 89 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 K7EP13 123 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 GNRH2O43555 120 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 ORM1P02763 201 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 SFTA3P0C7M3 94 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
COMMD4-216ENST00000567023 LGALSLQ3ZCW2 172 aaPredicted RBP9.72□□□□□ -0.85
COMMD4-216ENST00000567023 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 STOML3Q8TAV4 291 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 TREM1Q9NP99 234 aa9.72□□□□□ -0.85
COMMD4-216ENST00000567023 hCG_2014768A0A024R1R8 64 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 TRAV4A0A0B4J268 109 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 A0A1W2PRE2 83 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 UMAD1C9J7I0 102 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 M0R2P5 195 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 PFDN1O60925 122 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 C5orf17Q8NAS9 161 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 KCNS1Q96KK3 526 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 NAGKQ9UJ70 344 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.86
COMMD4-216ENST00000567023 TRAV9-2A0A087WT02 112 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 TCRAP04437 139 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 TYMSP04818 313 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 TPT1P13693 172 aaKnown RBP9.7□□□□□ -0.86
COMMD4-216ENST00000567023 SRIP30626 198 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 FHITP49789 147 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 GNG5P63218 68 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
COMMD4-216ENST00000567023 C9JCJ5 164 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 GYPEP15421 78 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-216ENST00000567023 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
COMMD4-216ENST00000567023 DPPA3Q6W0C5 159 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
COMMD4-216ENST00000567023 MBD3L1Q8WWY6 194 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 TXNDC17Q9BRA2 123 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
COMMD4-216ENST00000567023 A0A1B0GVG6 124 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 F6UZH7 168 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 SH2D6Q7Z4S9 175 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 NDFIP1Q9BT67 221 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 LY96Q9Y6Y9 160 aa9.68□□□□□ -0.86
COMMD4-216ENST00000567023 K7EQM0 130 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 CIDEAO60543 219 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 IGLV2-11P01706 119 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 DNAH10OSP0CZ25 163 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
COMMD4-216ENST00000567023 CYB561D1Q8N8Q1 229 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 FAM213BQ8TBF2 198 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 SGK494Q96LW2 274 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
COMMD4-216ENST00000567023 TNFRSF18Q9Y5U5 241 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
COMMD4-216ENST00000567023 FBLL1A6NHQ2 334 aaKnown RBP9.66□□□□□ -0.86
COMMD4-216ENST00000567023 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
COMMD4-216ENST00000567023 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms