RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RIF1Q5UIP0 2472 aaKnown RBP3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 TRAV13-1A0A0B4J241 112 aa3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 FSTL3O95633 263 aa3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 AGPAT4-IT1Q9H0P7 198 aa3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 DKK2Q9UBU2 259 aa3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 PKIGQ9Y2B9 76 aa3.42□□□□□ -1.86
LPCAT2-208ENST00000566915 IGLV11-55A0A075B6I3 123 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 WI2-2373I1.2A0A1W2PRP0 233 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 E9PLD3 99 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 K7EMT4 169 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 DEFB131AP59861 70 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 TMEM219Q86XT9 240 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 MCRIP2Q9BUT9 160 aaKnown RBP3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 OBSL1O75147 1896 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 INTS1Q8N201 2190 aaKnown RBP3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 COL4A3Q01955 1670 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 TNRC6AQ8NDV7 1962 aaKnown RBP3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 EP400Q96L91 3159 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 C19orf71A6NCJ1 209 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 ATOX1O00244 68 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 SAP30O75446 220 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 RBMY1FQ15415 496 aaKnown RBP3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 C9orf47Q6ZRZ4 202 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 MED12Q93074 2177 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 PIEZO1Q92508 2521 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 PLXND1Q9Y4D7 1925 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 ZNF318Q5VUA4 2279 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 A0A0U1RRA0 63 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 TAX1BP3O14907 124 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 BPESC1Q9GZL8 116 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 CACNA1EQ15878 2313 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 A0A1B0GXF2 115 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 C11orf86A6NJI1 115 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 IGKV1-17P01599 117 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 WT1P19544 449 aaPredicted RBP3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 TMEM258P61165 79 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 C15orf53Q8NAA6 179 aa3.41□□□□□ -1.86
LPCAT2-208ENST00000566915 SHANK1Q9Y566 2161 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 K7EIM0 57 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 CRYBA4P53673 196 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 FBXL19-AS1Q494R0 122 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 IGFL4Q6B9Z1 124 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 PATE2Q6UY27 113 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 SH2D6Q7Z4S9 175 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 DPH3Q96FX2 82 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 FAM215AQ9Y5M1 114 aa3.4□□□□□ -1.86
LPCAT2-208ENST00000566915 G3V4G9 280 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 C16orf54Q6UWD8 224 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 SLC25A29Q8N8R3 303 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 KLHL30-AS1Q8NEE0 82 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 NTN5Q8WTR8 489 aaPredicted RBP3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 TOMM6Q96B49 74 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 FGF23Q9GZV9 251 aaPredicted RBP3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 LINC00527Q9UJ94 153 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 UTRNP46939 3433 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 WNK2Q9Y3S1 2297 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 SYNJ2BPP57105 145 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 DYNAPQ8N1N2 210 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 RMI2Q96E14 147 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 ORMDL1Q9P0S3 153 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 A0A0B4J2C4 111 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 TEX48A0A1B0GUV7 120 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 JMJD7-PLA2G4BH0Y9G9 81 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 BUB3O43684 328 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 PDE6GP18545 87 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 ANKRD39Q53RE8 183 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 LCNL1Q6ZST4 164 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 PCP2Q8IVA1 136 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 Q96MF0 132 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 CEP250Q9BV73 2442 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 MYO7BQ6PIF6 2116 aa3.4□□□□□ -1.87
LPCAT2-208ENST00000566915 A0A1W2PNU3 283 aaPredicted RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 C2orf70A6NJV1 201 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 NUPR1O60356 82 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 CDK2AP2O75956 126 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 SPINK13Q1W4C9 94 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 YPEL4Q96NS1 127 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 TPSG1Q9NRR2 321 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 IGHV3-73A0A0B4J1V6 119 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 IGLV2-14P01704 120 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 NPC2P61916 151 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 PRB3Q04118 309 aaPredicted RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 FOXI1Q12951 378 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 LINC01620Q4KN68 170 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 TCTEX1D4Q5JR98 221 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 CDPF1Q6NVV7 123 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 DUX4L9Q6RFH8 374 aaPredicted RBP3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 TRBV10-2A0A0K0K1G8 114 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 ZNRF2Q8NHG8 242 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 CFHR4Q92496 578 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 CENPVL3A0A0U1RRI6 287 aa3.39□□□□□ -1.87
LPCAT2-208ENST00000566915 ZNF561-AS1K7EIQ3 104 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms