RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 F6UZH7 168 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 UPK1BO75841 260 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 MPC2O95563 127 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 TAS2R45P59539 299 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
ABCA3-204ENST00000566200 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
ABCA3-204ENST00000566200 GATA1P15976 413 aaPredicted RBP12.63□□□□□ -0.39
ABCA3-204ENST00000566200 GCSHP23434 173 aa12.63□□□□□ -0.39
ABCA3-204ENST00000566200 HAMPP81172 84 aa12.63□□□□□ -0.39
ABCA3-204ENST00000566200 FRZBQ92765 325 aa12.63□□□□□ -0.39
ABCA3-204ENST00000566200 DNAH8Q96JB1 4490 aa12.63□□□□□ -0.39
ABCA3-204ENST00000566200 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
ABCA3-204ENST00000566200 SMR3BP02814 79 aaPredicted RBP12.62□□□□□ -0.39
ABCA3-204ENST00000566200 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
ABCA3-204ENST00000566200 TIRAPP58753 221 aa12.62□□□□□ -0.39
ABCA3-204ENST00000566200 GNG5P63218 68 aa12.62□□□□□ -0.39
ABCA3-204ENST00000566200 CMTM2Q8TAZ6 248 aa12.62□□□□□ -0.39
ABCA3-204ENST00000566200 IGHV3-38A0A0C4DH36 116 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 C10orf126Q8N4M7 172 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 SCGB1C1Q8TD33 95 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 MARVELD1Q9BSK0 173 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 TREM1Q9NP99 234 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
ABCA3-204ENST00000566200 RAB2AP61019 212 aa12.6□□□□□ -0.39
ABCA3-204ENST00000566200 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
ABCA3-204ENST00000566200 ARL6IP6Q8N6S5 226 aa12.6□□□□□ -0.39
ABCA3-204ENST00000566200 NHLRC2Q8NBF2 726 aa12.6□□□□□ -0.39
ABCA3-204ENST00000566200 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
ABCA3-204ENST00000566200 ZNF80P51504 273 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-204ENST00000566200 LINC01556Q5JQF7 62 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 FAM74A1Q5RGS3 127 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 PQLC2Q6ZP29 291 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 SLC25A29Q8N8R3 303 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 SGK494Q96LW2 274 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 SDF2L1Q9HCN8 221 aa12.59□□□□□ -0.39
ABCA3-204ENST00000566200 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-204ENST00000566200 PPT1P50897 306 aa12.58□□□□□ -0.4
ABCA3-204ENST00000566200 ACOT6Q3I5F7 207 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-204ENST00000566200 ASB13Q8WXK3 278 aa12.58□□□□□ -0.4
ABCA3-204ENST00000566200 KCNS1Q96KK3 526 aa12.58□□□□□ -0.4
ABCA3-204ENST00000566200 SRRM2Q9UQ35 2752 aaKnown RBP12.57□□□□□ -0.4
ABCA3-204ENST00000566200 IGLV5-52A0A0A0MRZ9 124 aa12.57□□□□□ -0.4
ABCA3-204ENST00000566200 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
ABCA3-204ENST00000566200 RS1O15537 224 aa12.57□□□□□ -0.4
ABCA3-204ENST00000566200 PET100P0DJ07 73 aa12.57□□□□□ -0.4
ABCA3-204ENST00000566200 CFAP126Q5VTH2 177 aa12.57□□□□□ -0.4
ABCA3-204ENST00000566200 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
ABCA3-204ENST00000566200 SSNA1O43805 119 aa12.56□□□□□ -0.4
ABCA3-204ENST00000566200 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
ABCA3-204ENST00000566200 TMEM75Q8N9X5 138 aa12.56□□□□□ -0.4
ABCA3-204ENST00000566200 TMEM70Q9BUB7 260 aa12.56□□□□□ -0.4
ABCA3-204ENST00000566200 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 PSCAO43653 123 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 Q8N814 137 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 OR10G9Q8NGN4 311 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 OR10G7Q8NGN6 311 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 NTN5Q8WTR8 489 aaPredicted RBP12.55□□□□□ -0.4
ABCA3-204ENST00000566200 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 Q9HAA7 133 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 FAM30AQ9NZY2 134 aa12.55□□□□□ -0.4
ABCA3-204ENST00000566200 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
ABCA3-204ENST00000566200 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
ABCA3-204ENST00000566200 PFN1P07737 140 aaKnown RBP12.54□□□□□ -0.4
ABCA3-204ENST00000566200 FLG2Q5D862 2391 aaPredicted RBP12.54□□□□□ -0.4
ABCA3-204ENST00000566200 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 IGHV3-30P01768 117 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 TCRAP04437 139 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 IGHV3-30-3P0DP02 117 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 IGHV3-30-5P0DP03 117 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 WFDC2Q14508 124 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 RHOHQ15669 191 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 OR10J3Q5JRS4 329 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 Q8N3U1 123 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
ABCA3-204ENST00000566200 GCGP01275 180 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 STAG3L2P0CL84 134 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 STAG3L3P0CL85 134 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
ABCA3-204ENST00000566200 ZNF506Q5JVG8 444 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 LELP1Q5T871 98 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 C5orf17Q8NAS9 161 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 NDFIP1Q9BT67 221 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 PSG8Q9UQ74 426 aa12.52□□□□□ -0.41
ABCA3-204ENST00000566200 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 FAM229AH3BQW9 127 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 TAAR5O14804 337 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 CIDEAO60543 219 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
ABCA3-204ENST00000566200 Q6ZSN1 163 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 PTH2Q96A98 100 aa12.51□□□□□ -0.41
ABCA3-204ENST00000566200 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
ABCA3-204ENST00000566200 GCHFRP30047 84 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms