RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 C8orf49Q96NF6 230 aa10.35□□□□□ -0.75
CMTM3-212ENST00000566121 TXNDC17Q9BRA2 123 aa10.35□□□□□ -0.75
CMTM3-212ENST00000566121 TNFSF18Q9UNG2 199 aa10.35□□□□□ -0.75
CMTM3-212ENST00000566121 C9JCJ5 164 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 RAB2AP61019 212 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 PIK3CD-AS1Q5SR53 167 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 HYLS1Q96M11 299 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 TREM1Q9NP99 234 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 TMEM167BQ9NRX6 74 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
CMTM3-212ENST00000566121 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 SRIP30626 198 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
CMTM3-212ENST00000566121 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 SDF2L1Q9HCN8 221 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 LY96Q9Y6Y9 160 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
CMTM3-212ENST00000566121 K7EQM0 130 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 TAAR5O14804 337 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 GNRH2O43555 120 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 TCRAP04437 139 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 GIPP09681 153 aaPredicted RBP10.32□□□□□ -0.76
CMTM3-212ENST00000566121 ARL14EPLP0DKL9 152 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 GATA1P15976 413 aaPredicted RBP10.32□□□□□ -0.76
CMTM3-212ENST00000566121 ATP6V0CP27449 155 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 Q8N1X5 172 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 C10orf126Q8N4M7 172 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 OR4C5Q8NGB2 326 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
CMTM3-212ENST00000566121 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 EREGO14944 169 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 CXorf1O96002 111 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 IGLV2-11P01706 119 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 TYMSP04818 313 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 GYPEP15421 78 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 GCHFRP30047 84 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 SAPCD1Q5SSQ6 148 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 PCNPQ8WW12 178 aaKnown RBP10.31□□□□□ -0.76
CMTM3-212ENST00000566121 KRTAP4-5Q9BYR2 181 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 NKX6-2Q9C056 277 aaPredicted RBP10.31□□□□□ -0.76
CMTM3-212ENST00000566121 MED28Q9H204 178 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 EPDR1Q9UM22 224 aa10.31□□□□□ -0.76
CMTM3-212ENST00000566121 TRAV8-1A0A0A6YYK1 113 aa10.3□□□□□ -0.76
CMTM3-212ENST00000566121 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
CMTM3-212ENST00000566121 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
CMTM3-212ENST00000566121 SFTA3P0C7M3 94 aa10.3□□□□□ -0.76
CMTM3-212ENST00000566121 EVI2AP22794 236 aa10.3□□□□□ -0.76
CMTM3-212ENST00000566121 TMEM75Q8N9X5 138 aa10.3□□□□□ -0.76
CMTM3-212ENST00000566121 ACTR3CQ9C0K3 210 aaPredicted RBP10.3□□□□□ -0.76
CMTM3-212ENST00000566121 RS1O15537 224 aa10.29□□□□□ -0.76
CMTM3-212ENST00000566121 ERVFC1-1P60608 527 aa10.29□□□□□ -0.76
CMTM3-212ENST00000566121 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
CMTM3-212ENST00000566121 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
CMTM3-212ENST00000566121 PSG8Q9UQ74 426 aa10.29□□□□□ -0.76
CMTM3-212ENST00000566121 SUMO1P63165 101 aaKnown RBP10.28□□□□□ -0.76
CMTM3-212ENST00000566121 FLI1Q01543 452 aaPredicted RBP10.28□□□□□ -0.76
CMTM3-212ENST00000566121 SMUG1Q53HV7 270 aa10.28□□□□□ -0.76
CMTM3-212ENST00000566121 MAPKAPK5-AS1Q8N8E1 139 aa10.28□□□□□ -0.76
CMTM3-212ENST00000566121 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
CMTM3-212ENST00000566121 HSD17B11Q8NBQ5 300 aa10.28□□□□□ -0.76
CMTM3-212ENST00000566121 INO80EQ8NBZ0 244 aaPredicted RBP10.28□□□□□ -0.76
CMTM3-212ENST00000566121 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.77
CMTM3-212ENST00000566121 GNG5P63218 68 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 CFAP126Q5VTH2 177 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 MSRB1Q9NZV6 116 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 NAGKQ9UJ70 344 aa10.27□□□□□ -0.77
CMTM3-212ENST00000566121 GGTLC3B5MD39 225 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 F6UZH7 168 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
CMTM3-212ENST00000566121 GCGP01275 180 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
CMTM3-212ENST00000566121 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 LINC01556Q5JQF7 62 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 RPH3ALQ9UNE2 315 aa10.26□□□□□ -0.77
CMTM3-212ENST00000566121 A0A087WTM6 91 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 BORCS7-ASMTA0A0B4J1R7 106 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 CTXND1A0A1B0GTU2 59 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 MGST1P10620 155 aaKnown RBP10.25□□□□□ -0.77
CMTM3-212ENST00000566121 RHOHQ15669 191 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 Q5BKY6 102 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 HIST1H2BAQ96A08 127 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
CMTM3-212ENST00000566121 IGHV3-38A0A0C4DH36 116 aa10.24□□□□□ -0.77
CMTM3-212ENST00000566121 FABP5P3A8MUU1 101 aa10.24□□□□□ -0.77
CMTM3-212ENST00000566121 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
CMTM3-212ENST00000566121 RNASE3P12724 160 aaKnown RBP10.24□□□□□ -0.77
CMTM3-212ENST00000566121 PPT1P50897 306 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms