RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 TIMM21Q9BVV7 248 aa4.85□□□□□ -1.63
PTPN9-204ENST00000564970 Q9H3A6 140 aa4.85□□□□□ -1.63
PTPN9-204ENST00000564970 GNG12Q9UBI6 72 aa4.85□□□□□ -1.63
PTPN9-204ENST00000564970 RPUSD1Q9UJJ7 312 aaKnown RBP4.85□□□□□ -1.63
PTPN9-204ENST00000564970 TNRC6BQ9UPQ9 1833 aaKnown RBP4.85□□□□□ -1.63
PTPN9-204ENST00000564970 MYO9BQ13459 2157 aa4.85□□□□□ -1.63
PTPN9-204ENST00000564970 HELZ2Q9BYK8 2649 aaKnown RBP4.85□□□□□ -1.63
PTPN9-204ENST00000564970 VPS13AQ96RL7 3174 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 IGHV1-45A0A0A0MS14 117 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1BA6NDE4 496 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1EA6NEQ0 496 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 LINC01548A6NM66 108 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 TEX22C9J3V5 150 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 DKK1O94907 266 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1DP0C7P1 496 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1A1P0DJD3 496 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1CP0DJD4 496 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 GATA1P15976 413 aaPredicted RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 CD24P25063 80 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 ERHP84090 104 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 KLKP1Q107X0 134 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 ERCC8Q13216 396 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 PDE6HQ13956 83 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 RBMY1FQ15415 496 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 NNATQ16517 81 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 LINC00322Q6ZN03 302 aaPredicted RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 C20orf204Q6ZNR8 217 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 ZCCHC24Q8N2G6 241 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 C10orf105Q8TEF2 133 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 ZNF524Q96C55 264 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 PRR25Q96S07 402 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 DAZ1Q9NQZ3 744 aaKnown RBP4.84□□□□□ -1.63
PTPN9-204ENST00000564970 ICOSQ9Y6W8 199 aa4.84□□□□□ -1.63
PTPN9-204ENST00000564970 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 NDUFB3O43676 98 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 NDUFA3O95167 84 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 FSTL3O95633 263 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF883P0CG24 379 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 CD52P31358 61 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 CRIP2P52943 208 aaPredicted RBP4.83□□□□□ -1.64
PTPN9-204ENST00000564970 BRWD1-AS2P59051 145 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 HILS1P60008 231 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 CFHR1Q03591 330 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 DAZ2Q13117 558 aaKnown RBP4.83□□□□□ -1.64
PTPN9-204ENST00000564970 LYZL1Q6UWQ5 148 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 NUP37Q8NFH4 326 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 TMEM141Q96I45 108 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 RETNQ9HD89 108 aa4.83□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF71Q9NQZ8 489 aaPredicted RBP4.83□□□□□ -1.64
PTPN9-204ENST00000564970 ANKRD17O75179 2603 aaKnown RBP4.83□□□□□ -1.64
PTPN9-204ENST00000564970 IGKV3D-11A0A0A0MRZ8 115 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 IGHV1-58A0A0C4DH39 117 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 LILRA5A6NI73 299 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 TRIAP1O43715 76 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 SS18L1O75177 396 aaPredicted RBP4.82□□□□□ -1.64
PTPN9-204ENST00000564970 IGLV2-11P01706 119 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 IGHV3-13P01766 116 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 PF4P02776 101 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF22P17026 224 aaPredicted RBP4.82□□□□□ -1.64
PTPN9-204ENST00000564970 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
PTPN9-204ENST00000564970 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 RSPO2Q6UXX9 243 aaPredicted RBP4.82□□□□□ -1.64
PTPN9-204ENST00000564970 LINC00305Q7Z4B0 112 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 FGFBP3Q8TAT2 258 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF837Q96EG3 531 aaPredicted RBP4.82□□□□□ -1.64
PTPN9-204ENST00000564970 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF462Q96JM2 2506 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 SMG1Q96Q15 3661 aaKnown RBP4.81□□□□□ -1.64
PTPN9-204ENST00000564970 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 TRAV41A0A0B4J266 112 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 LMO7DNF2Z398 122 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 M0R381 172 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 LEPROTO15243 131 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 TIMM17BO60830 172 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 IGHV4-39P01824 125 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 ZNF826PQ6ZT77 177 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 C9orf139Q6ZV77 190 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 LINC01561Q8N1V8 128 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 FANCD2OSQ96PS1 177 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 SLC50A1Q9BRV3 221 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 CEP192Q8TEP8 1941 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 ALPK2Q86TB3 2170 aa4.81□□□□□ -1.64
PTPN9-204ENST00000564970 EML6Q6ZMW3 1958 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 IGHV4-4A0A075B6R2 117 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 IGKV1OR2-108A0A075B7D4 117 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 IQCF6A8MYZ5 107 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 C12orf77C9JDV5 145 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 M0R3E3 92 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 NXPH4O95158 308 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 DNAL4O96015 105 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 RNASE2P10153 161 aaKnown RBP4.8□□□□□ -1.64
PTPN9-204ENST00000564970 RPS21P63220 83 aaKnown RBP4.8□□□□□ -1.64
PTPN9-204ENST00000564970 FOXF2Q12947 444 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 SPINK9Q5DT21 86 aa4.8□□□□□ -1.64
PTPN9-204ENST00000564970 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms