RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 ZNF207O43670 478 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 ORM1P02763 201 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 ERCC8Q13216 396 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 SAMD13Q5VXD3 122 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 ZNF575Q86XF7 245 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 RNF182Q8N6D2 247 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 MIEN1Q9BRT3 115 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 TMEM70Q9BUB7 260 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 TMEM191AQ9H0A3 160 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 KLK15Q9H2R5 256 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 VPS13CQ709C8 3753 aa5.52□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV3OR16-13A0A075B7E8 117 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 TMSB15BA0A087X1C1 80 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV3-74A0A0B4J1X5 117 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 C20orf202A1L168 122 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 OVOL1O14753 267 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 DEFB112Q30KQ8 113 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 TDRG1Q3Y452 100 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 EBLN2Q6P2I7 272 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 UNQ9165/PRO28630Q6UXU0 137 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 ORMDL3Q8N138 153 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 KLHDC1Q8N7A1 406 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 C2orf88Q9BSF0 95 aa5.51□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV3-49A0A0A0MS15 119 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV1-24A0A0C4DH33 117 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV7-4-1A0A0J9YVY3 117 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 TRBV7-9A0A0J9YWB2 115 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 FSHBP01225 129 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 TRBV12-3P01733 135 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PPBPP02775 128 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 NPSP0C0P6 89 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PSMB8P28062 276 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 TWIST1Q15672 202 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 DAZ1Q9NQZ3 744 aaKnown RBP5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 HSPB8Q9UJY1 196 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PAM16Q9Y3D7 125 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 CSPG4Q6UVK1 2322 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 TMEM213A2RRL7 107 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 SOCS3O14543 225 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV3-11P01762 117 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV4-59P01825 116 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PRB4P10163 310 aaPredicted RBP5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 FOXE3Q13461 319 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 DEFB113Q30KQ7 82 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PRSS57Q6UWY2 283 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PRSS3P2Q8NHM4 247 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 PRELID3AQ96N28 172 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 LAMTOR2Q9Y2Q5 125 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 CHD6Q8TD26 2715 aa5.5□□□□□ -1.53
HERPUD1-209ENST00000564678 IGKV3D-20A0A0C4DH25 116 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 M0R143 59 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 MRPL51Q4U2R6 128 aaKnown RBP5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 SPATA45Q537H7 98 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 Q6YL49 198 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 FA2HQ7L5A8 372 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 OR10J6PQ8NGY7 276 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 SMPXQ9UHP9 88 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV4-4A0A075B6R2 117 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 TRAV9-2A0A087WT02 112 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 D6R8Y8 96 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 SYS1-DBNDD2H3BUS1 97 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 IGHV4-31P0DP07 118 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 SPATA12Q7Z6I5 190 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 ZNF738Q8NE65 137 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 OR10AG1Q8NH19 301 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 RHPN1-AS1Q9BWJ2 59 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 MAP1LC3CQ9BXW4 147 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 VPREB3Q9UKI3 123 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 UFC1Q9Y3C8 167 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 FLNCQ14315 2725 aa5.49□□□□□ -1.53
HERPUD1-209ENST00000564678 MYO18BQ8IUG5 2567 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 SNAI2O43623 268 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 CKS2P33552 79 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 CACNG7P62955 275 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 ZNF705AQ6ZN79 300 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 SMIM15Q7Z3B0 74 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 PRRC2AP48634 2157 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 TRAV21A0A0B4J279 112 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 SIVA1O15304 175 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 TCF21O43680 179 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 IGLC3P0DOY3 106 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 ID1P41134 155 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 APRG1Q8IVJ8 170 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 TEX29Q8N6K0 151 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 C20orf173Q96LM9 149 aa5.48□□□□□ -1.53
HERPUD1-209ENST00000564678 FAM208BQ5VWN6 2430 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 NDUFA7O95182 113 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 IFI27P40305 119 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 OR8A1Q8NGG7 326 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 MYOZ3Q8TDC0 251 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 RNF185Q96GF1 192 aa5.47□□□□□ -1.53
HERPUD1-209ENST00000564678 FAM19A4Q96LR4 140 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms