RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 ZNF479Q96JC4 524 aa17.43■□□□□ 0.38
AC009041.3-201ENST00000564390 TRGV4A0A0C4DH28 118 aa17.42■□□□□ 0.38
AC009041.3-201ENST00000564390 ZNF80P51504 273 aaPredicted RBP17.42■□□□□ 0.38
AC009041.3-201ENST00000564390 PSG8Q9UQ74 426 aa17.42■□□□□ 0.38
AC009041.3-201ENST00000564390 HHLA3Q9XRX5 114 aa17.42■□□□□ 0.38
AC009041.3-201ENST00000564390 K7EQM0 130 aa17.41■□□□□ 0.38
AC009041.3-201ENST00000564390 TTC32Q5I0X7 151 aa17.41■□□□□ 0.38
AC009041.3-201ENST00000564390 RASL10AQ92737 203 aa17.41■□□□□ 0.38
AC009041.3-201ENST00000564390 SDF2L1Q9HCN8 221 aa17.41■□□□□ 0.38
AC009041.3-201ENST00000564390 EPDR1Q9UM22 224 aa17.41■□□□□ 0.38
AC009041.3-201ENST00000564390 CTXND1A0A1B0GTU2 59 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 IGLV2-11P01706 119 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 FGF8P55075 233 aaPredicted RBP17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 PRNTQ86SH4 94 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 ZNF575Q86XF7 245 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 CYB561D1Q8N8Q1 229 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 C11orf21Q9P2W6 132 aa17.4■□□□□ 0.38
AC009041.3-201ENST00000564390 UBE2G2P60604 165 aa17.39■□□□□ 0.37
AC009041.3-201ENST00000564390 FLI1Q01543 452 aaPredicted RBP17.39■□□□□ 0.37
AC009041.3-201ENST00000564390 SLAQ13239 276 aa17.39■□□□□ 0.37
AC009041.3-201ENST00000564390 AKR1C8PQ5T2L2 129 aa17.39■□□□□ 0.37
AC009041.3-201ENST00000564390 M0R2P5 195 aa17.38■□□□□ 0.37
AC009041.3-201ENST00000564390 GCGP01275 180 aa17.38■□□□□ 0.37
AC009041.3-201ENST00000564390 TMEM75Q8N9X5 138 aa17.38■□□□□ 0.37
AC009041.3-201ENST00000564390 CYTL1Q9NRR1 136 aa17.38■□□□□ 0.37
AC009041.3-201ENST00000564390 KCNS1Q96KK3 526 aa17.37■□□□□ 0.37
AC009041.3-201ENST00000564390 LINC00479Q96M42 142 aa17.37■□□□□ 0.37
AC009041.3-201ENST00000564390 TRAV4A0A0B4J268 109 aa17.36■□□□□ 0.37
AC009041.3-201ENST00000564390 TRAV34A0A0B4J273 112 aa17.36■□□□□ 0.37
AC009041.3-201ENST00000564390 A0A1W2PRE2 83 aa17.36■□□□□ 0.37
AC009041.3-201ENST00000564390 TAAR5O14804 337 aa17.36■□□□□ 0.37
AC009041.3-201ENST00000564390 NXPH4O95158 308 aa17.36■□□□□ 0.37
AC009041.3-201ENST00000564390 IFNA7P01567 189 aa17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 MRPL23Q16540 153 aaKnown RBP17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 ZFP69Q49AA0 526 aa17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 SMUG1Q53HV7 270 aa17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 OR4C5Q8NGB2 326 aa17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 DYNC1H1Q14204 4646 aaKnown RBP17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 DNAH11Q96DT5 4516 aa17.35■□□□□ 0.37
AC009041.3-201ENST00000564390 PFN1P07737 140 aaKnown RBP17.34■□□□□ 0.37
AC009041.3-201ENST00000564390 GYPEP15421 78 aa17.34■□□□□ 0.37
AC009041.3-201ENST00000564390 A0A1W2PPQ1 181 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 MAP1LC3B2A6NCE7 125 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 K7EQD1 137 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 SIVA1O15304 175 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 LYPD5Q6UWN5 251 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 PCNPQ8WW12 178 aaKnown RBP17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 MAP1LC3BQ9GZQ8 125 aa17.33■□□□□ 0.36
AC009041.3-201ENST00000564390 FAM74A7A6NL05 159 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 C9JCJ5 164 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 PEX7O00628 323 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 SRIP30626 198 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 NEGR1Q7Z3B1 354 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 ARL2-SNX15V9GYD0 113 aa17.32■□□□□ 0.36
AC009041.3-201ENST00000564390 LOC100131303A0A0U1RQF7 123 aa17.31■□□□□ 0.36
AC009041.3-201ENST00000564390 MED14OSP0DP75 135 aa17.31■□□□□ 0.36
AC009041.3-201ENST00000564390 Q86TA4 180 aa17.31■□□□□ 0.36
AC009041.3-201ENST00000564390 FHITP49789 147 aa17.3■□□□□ 0.36
AC009041.3-201ENST00000564390 LINC00315P59091 139 aa17.3■□□□□ 0.36
AC009041.3-201ENST00000564390 SAPCD1Q5SSQ6 148 aa17.3■□□□□ 0.36
AC009041.3-201ENST00000564390 FBLL1A6NHQ2 334 aaKnown RBP17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 ORM1P02763 201 aa17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 ZNF876PQ49A33 203 aa17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 KCNRGQ8N5I3 272 aa17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 OR11H4Q8NGC9 324 aa17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 C9orf85Q96MD7 179 aa17.29■□□□□ 0.36
AC009041.3-201ENST00000564390 PPT1P50897 306 aa17.28■□□□□ 0.36
AC009041.3-201ENST00000564390 DPPA3Q6W0C5 159 aa17.28■□□□□ 0.36
AC009041.3-201ENST00000564390 ZNF345Q14585 488 aa17.27■□□□□ 0.36
AC009041.3-201ENST00000564390 IGHV3-73A0A0B4J1V6 119 aa17.26■□□□□ 0.35
AC009041.3-201ENST00000564390 C16orf90A8MZG2 172 aa17.26■□□□□ 0.35
AC009041.3-201ENST00000564390 RNASE3P12724 160 aaKnown RBP17.26■□□□□ 0.35
AC009041.3-201ENST00000564390 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
AC009041.3-201ENST00000564390 ZNF506Q5JVG8 444 aa17.26■□□□□ 0.35
AC009041.3-201ENST00000564390 PGPEP1LA6NFU8 196 aa17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 CFAP126Q5VTH2 177 aa17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 WFDC10BQ8IUB3 73 aa17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 HIST1H2BAQ96A08 127 aa17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 TXNDC17Q9BRA2 123 aa17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 NKX6-2Q9C056 277 aaPredicted RBP17.25■□□□□ 0.35
AC009041.3-201ENST00000564390 IGKV3D-20A0A0C4DH25 116 aa17.24■□□□□ 0.35
AC009041.3-201ENST00000564390 RS1O15537 224 aa17.24■□□□□ 0.35
AC009041.3-201ENST00000564390 NHLRC2Q8NBF2 726 aa17.24■□□□□ 0.35
AC009041.3-201ENST00000564390 A0A1B0GV50 99 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 CST9LP1Q5W188 147 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 SPATA12Q7Z6I5 190 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 STOML3Q8TAV4 291 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 FAM213BQ8TBF2 198 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 ZC2HC1AQ96GY0 325 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 ZNF471Q9BX82 626 aaPredicted RBP17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 KRTAP17-1Q9BYP8 105 aa17.23■□□□□ 0.35
AC009041.3-201ENST00000564390 HMSDA8MTL9 139 aa17.22■□□□□ 0.35
AC009041.3-201ENST00000564390 BCL2L11O43521 198 aa17.22■□□□□ 0.35
AC009041.3-201ENST00000564390 Q6ZRN7 208 aaPredicted RBP17.22■□□□□ 0.35
AC009041.3-201ENST00000564390 SLC25A29Q8N8R3 303 aa17.22■□□□□ 0.35
AC009041.3-201ENST00000564390 TNFRSF18Q9Y5U5 241 aa17.22■□□□□ 0.35
AC009041.3-201ENST00000564390 KANTRA0A1W2PQU2 76 aa17.21■□□□□ 0.35
AC009041.3-201ENST00000564390 FABP5P3A8MUU1 101 aa17.21■□□□□ 0.35
AC009041.3-201ENST00000564390 BTF3P20290 206 aaKnown RBP17.21■□□□□ 0.35
AC009041.3-201ENST00000564390 S100A4P26447 101 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms