RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
CMTM3-208ENST00000564247 PPP1R2P9O14990 202 aa12.34□□□□□ -0.43
CMTM3-208ENST00000564247 SNAPINO95295 136 aa12.34□□□□□ -0.43
CMTM3-208ENST00000564247 S100A1P23297 94 aa12.34□□□□□ -0.43
CMTM3-208ENST00000564247 NAGKQ9UJ70 344 aa12.34□□□□□ -0.43
CMTM3-208ENST00000564247 IGHV3OR16-12A0A075B7B8 117 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 IGHV1OR15-1A0A075B7D0 117 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 ZNF705GA8MUZ8 300 aaPredicted RBP12.33□□□□□ -0.44
CMTM3-208ENST00000564247 Q6ZWC4 215 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 CSNK1G2-AS1Q8NCQ2 148 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 CLRN3Q8NCR9 226 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
CMTM3-208ENST00000564247 ATP6V1G1O75348 118 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 RPS20P60866 119 aaKnown RBP12.32□□□□□ -0.44
CMTM3-208ENST00000564247 MUC21Q5SSG8 566 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 C1orf158Q8N1D5 194 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 ANAPC16Q96DE5 110 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
CMTM3-208ENST00000564247 DNAH7Q8WXX0 4024 aa12.32□□□□□ -0.44
CMTM3-208ENST00000564247 NBEAL2Q6ZNJ1 2754 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 HTN1P15515 57 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 RHEBQ15382 184 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 RNF212Q495C1 297 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 Q6ZQT7 251 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
CMTM3-208ENST00000564247 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 CBY3A6NI87 242 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 A8MWL6 223 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 RBMY1A1P0DJD3 496 aaKnown RBP12.3□□□□□ -0.44
CMTM3-208ENST00000564247 RBMY1CP0DJD4 496 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 RBMY1FQ15415 496 aaKnown RBP12.3□□□□□ -0.44
CMTM3-208ENST00000564247 DEFB135Q30KP9 77 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 C11orf21Q9P2W6 132 aa12.3□□□□□ -0.44
CMTM3-208ENST00000564247 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 C7orf77A4D0Y5 90 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 SPRY2O43597 315 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 CT83Q5H943 113 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-208ENST00000564247 RNF183Q96D59 192 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 RPS10P5Q9NQ39 176 aa12.29□□□□□ -0.44
CMTM3-208ENST00000564247 KMT2CQ8NEZ4 4911 aaKnown RBP12.29□□□□□ -0.44
CMTM3-208ENST00000564247 SMIM9A6NGZ8 99 aa12.28□□□□□ -0.44
CMTM3-208ENST00000564247 S100A4P26447 101 aaKnown RBP12.28□□□□□ -0.44
CMTM3-208ENST00000564247 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
CMTM3-208ENST00000564247 TP53TG1Q9Y2A0 90 aa12.28□□□□□ -0.44
CMTM3-208ENST00000564247 V9GYV3 84 aa12.28□□□□□ -0.44
CMTM3-208ENST00000564247 A0A087WWC5 75 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 GNRH2O43555 120 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 ASIPP42127 132 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 OR11H2Q8NH07 326 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 NEU1Q99519 415 aa12.27□□□□□ -0.45
CMTM3-208ENST00000564247 GRIFINA4D1Z8 144 aa12.26□□□□□ -0.45
CMTM3-208ENST00000564247 TYMSP04818 313 aa12.26□□□□□ -0.45
CMTM3-208ENST00000564247 CXCL1P09341 107 aa12.26□□□□□ -0.45
CMTM3-208ENST00000564247 TSKUQ8WUA8 353 aa12.26□□□□□ -0.45
CMTM3-208ENST00000564247 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
CMTM3-208ENST00000564247 C3orf84H3BNL1 204 aa12.25□□□□□ -0.45
CMTM3-208ENST00000564247 DNLZQ5SXM8 178 aa12.25□□□□□ -0.45
CMTM3-208ENST00000564247 ZNF493Q6ZR52 646 aa12.25□□□□□ -0.45
CMTM3-208ENST00000564247 TP53TG3Q9ULZ0 132 aa12.25□□□□□ -0.45
CMTM3-208ENST00000564247 A0A1W2PPQ1 181 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 FAM231BA6NCW3 169 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 GZMBP10144 247 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 MUC7Q8TAX7 377 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 GFRA4Q9GZZ7 299 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 IL36BQ9NZH7 164 aa12.24□□□□□ -0.45
CMTM3-208ENST00000564247 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 AZU1P20160 251 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
CMTM3-208ENST00000564247 C16orf74Q96GX8 76 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 IMMP2LQ96T52 175 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 TPPP3Q9BW30 176 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
CMTM3-208ENST00000564247 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 SNURFLB1AK76 121 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 F2Z2F3 143 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 PRM2P04554 102 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 MIFP14174 115 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 S100PP25815 95 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 KCNIP4Q6PIL6 250 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 BORCS7Q96B45 105 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 RETNQ9HD89 108 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
CMTM3-208ENST00000564247 TIMM8BQ9Y5J9 83 aaPredicted RBP12.22□□□□□ -0.45
CMTM3-208ENST00000564247 X6R8D5 127 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms