RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CMTM2Q8TAZ6 248 aa14.15□□□□□ -0.14
CHD9-208ENST00000563410 C9JCJ5 164 aa14.14□□□□□ -0.15
CHD9-208ENST00000563410 TYMSP04818 313 aa14.14□□□□□ -0.15
CHD9-208ENST00000563410 PET100P0DJ07 73 aa14.14□□□□□ -0.15
CHD9-208ENST00000563410 EVI2AP22794 236 aa14.14□□□□□ -0.15
CHD9-208ENST00000563410 TXNDC17Q9BRA2 123 aa14.14□□□□□ -0.15
CHD9-208ENST00000563410 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 TRAV21A0A0B4J279 112 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 F6UZH7 168 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 FAM74A1Q5RGS3 127 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 PQLC2Q6ZP29 291 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 ARL6IP6Q8N6S5 226 aa14.13□□□□□ -0.15
CHD9-208ENST00000563410 SSNA1O43805 119 aa14.12□□□□□ -0.15
CHD9-208ENST00000563410 RAB2AP61019 212 aa14.12□□□□□ -0.15
CHD9-208ENST00000563410 ACOT6Q3I5F7 207 aaPredicted RBP14.12□□□□□ -0.15
CHD9-208ENST00000563410 TREM1Q9NP99 234 aa14.12□□□□□ -0.15
CHD9-208ENST00000563410 DMBT1Q9UGM3 2413 aaPredicted RBP14.11□□□□□ -0.15
CHD9-208ENST00000563410 CRYGDP07320 174 aa14.11□□□□□ -0.15
CHD9-208ENST00000563410 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
CHD9-208ENST00000563410 GNG5P63218 68 aa14.11□□□□□ -0.15
CHD9-208ENST00000563410 A0A1W2PPV4 95 aa14.1□□□□□ -0.15
CHD9-208ENST00000563410 C10orf126Q8N4M7 172 aa14.1□□□□□ -0.15
CHD9-208ENST00000563410 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
CHD9-208ENST00000563410 HMGB3O15347 200 aaKnown RBP14.09□□□□□ -0.15
CHD9-208ENST00000563410 TIRAPP58753 221 aa14.09□□□□□ -0.15
CHD9-208ENST00000563410 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
CHD9-208ENST00000563410 INAFM2P0DMQ5 153 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 Q5VSD8 79 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 SH2D6Q7Z4S9 175 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 NHLRC2Q8NBF2 726 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 OR10G9Q8NGN4 311 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 OR10G7Q8NGN6 311 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 ASB13Q8WXK3 278 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 SGK494Q96LW2 274 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 C11orf21Q9P2W6 132 aa14.08□□□□□ -0.16
CHD9-208ENST00000563410 DNAH8Q96JB1 4490 aa14.07□□□□□ -0.16
CHD9-208ENST00000563410 IGHV3-38A0A0C4DH36 116 aa14.07□□□□□ -0.16
CHD9-208ENST00000563410 ZNF80P51504 273 aaPredicted RBP14.07□□□□□ -0.16
CHD9-208ENST00000563410 DPPA3Q6W0C5 159 aa14.07□□□□□ -0.16
CHD9-208ENST00000563410 MYCBP2O75592 4640 aa14.07□□□□□ -0.16
CHD9-208ENST00000563410 FLG2Q5D862 2391 aaPredicted RBP14.07□□□□□ -0.16
CHD9-208ENST00000563410 LRCOL1A6NCL2 159 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 A6NHS1 94 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 ARL14EPLP0DKL9 152 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 GCSHP23434 173 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 LINC01556Q5JQF7 62 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 SLC25A29Q8N8R3 303 aa14.06□□□□□ -0.16
CHD9-208ENST00000563410 SRRM2Q9UQ35 2752 aaKnown RBP14.05□□□□□ -0.16
CHD9-208ENST00000563410 FBLL1A6NHQ2 334 aaKnown RBP14.05□□□□□ -0.16
CHD9-208ENST00000563410 RS1O15537 224 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 STAG3L2P0CL84 134 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 STAG3L3P0CL85 134 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 PPT1P50897 306 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 ZNF876PQ49A33 203 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 CFAP126Q5VTH2 177 aa14.05□□□□□ -0.16
CHD9-208ENST00000563410 TCRAP04437 139 aa14.04□□□□□ -0.16
CHD9-208ENST00000563410 CDC34P49427 236 aaPredicted RBP14.04□□□□□ -0.16
CHD9-208ENST00000563410 SUN5Q8TC36 379 aa14.04□□□□□ -0.16
CHD9-208ENST00000563410 FRZBQ92765 325 aa14.04□□□□□ -0.16
CHD9-208ENST00000563410 SERTM2A0A1B0GWG4 89 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 IBA57-AS1B1ANH7 110 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 SMR3BP02814 79 aaPredicted RBP14.03□□□□□ -0.16
CHD9-208ENST00000563410 PFN1P07737 140 aaKnown RBP14.03□□□□□ -0.16
CHD9-208ENST00000563410 DEFA1P59665 94 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 DEFA3P59666 94 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 OR2G3Q8NGZ4 309 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 C9orf85Q96MD7 179 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 NDFIP1Q9BT67 221 aa14.03□□□□□ -0.16
CHD9-208ENST00000563410 TRBV6-4A0A1B0GX49 114 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 CIDEAO60543 219 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 IGLV2-11P01706 119 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 TMEM75Q8N9X5 138 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 C5orf17Q8NAS9 161 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 RAB24Q969Q5 203 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 PSG8Q9UQ74 426 aa14.02□□□□□ -0.17
CHD9-208ENST00000563410 IGHV3-73A0A0B4J1V6 119 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 PGPEP1LA6NFU8 196 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 TAAR5O14804 337 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 PSCAO43653 123 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 GCGP01275 180 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 GCHFRP30047 84 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 HAMPP81172 84 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 RHOHQ15669 191 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 HSD17B11Q8NBQ5 300 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 PRADC1Q9BSG0 188 aa14.01□□□□□ -0.17
CHD9-208ENST00000563410 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
CHD9-208ENST00000563410 TRAV8-6A0A0B4J262 113 aa14□□□□□ -0.17
CHD9-208ENST00000563410 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
CHD9-208ENST00000563410 OR10J3Q5JRS4 329 aa14□□□□□ -0.17
CHD9-208ENST00000563410 ZNF506Q5JVG8 444 aa14□□□□□ -0.17
CHD9-208ENST00000563410 PTH2Q96A98 100 aa14□□□□□ -0.17
CHD9-208ENST00000563410 GGTLC3B5MD39 225 aa13.99□□□□□ -0.17
CHD9-208ENST00000563410 SUMO1P63165 101 aaKnown RBP13.99□□□□□ -0.17
CHD9-208ENST00000563410 LELP1Q5T871 98 aa13.99□□□□□ -0.17
CHD9-208ENST00000563410 NTN5Q8WTR8 489 aaPredicted RBP13.99□□□□□ -0.17
CHD9-208ENST00000563410 PSMG3Q9BT73 122 aaPredicted RBP13.99□□□□□ -0.17
CHD9-208ENST00000563410 Q9HAA7 133 aa13.99□□□□□ -0.17
CHD9-208ENST00000563410 IGHV3-30P01768 117 aa13.98□□□□□ -0.17
CHD9-208ENST00000563410 IGHV3-33P01772 117 aa13.98□□□□□ -0.17
CHD9-208ENST00000563410 IGHV3-30-3P0DP02 117 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms