RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
UBR1-204ENST00000563239 TRAV21A0A0B4J279 112 aa6□□□□□ -1.45
UBR1-204ENST00000563239 TRBV6-1A0A0K0K1D8 114 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GAGE12BA1L429 117 aa6□□□□□ -1.45
UBR1-204ENST00000563239 FBLL1A6NHQ2 334 aaKnown RBP6□□□□□ -1.45
UBR1-204ENST00000563239 K7EQM0 130 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GNRH2O43555 120 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GAGE7O76087 117 aa6□□□□□ -1.45
UBR1-204ENST00000563239 LY6G6CO95867 125 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GCGP01275 180 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GAGE12FP0CL80 117 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GAGE12GP0CL81 117 aa6□□□□□ -1.45
UBR1-204ENST00000563239 GAGE12IP0CL82 117 aa6□□□□□ -1.45
UBR1-204ENST00000563239 HOXA5P20719 270 aa6□□□□□ -1.45
UBR1-204ENST00000563239 CRIP1P50238 77 aa6□□□□□ -1.45
UBR1-204ENST00000563239 CST9LP1Q5W188 147 aa6□□□□□ -1.45
UBR1-204ENST00000563239 EIF5AL1Q6IS14 154 aaKnown RBP6□□□□□ -1.45
UBR1-204ENST00000563239 TMEM88Q6PEY1 159 aa6□□□□□ -1.45
UBR1-204ENST00000563239 COX8CQ7Z4L0 72 aa6□□□□□ -1.45
UBR1-204ENST00000563239 Q86TA4 180 aa6□□□□□ -1.45
UBR1-204ENST00000563239 ZNF575Q86XF7 245 aa6□□□□□ -1.45
UBR1-204ENST00000563239 FAM210BQ96KR6 192 aa6□□□□□ -1.45
UBR1-204ENST00000563239 C18orf15Q96N68 181 aa6□□□□□ -1.45
UBR1-204ENST00000563239 IGHV3-16A0A0C4DH30 117 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 TYMSP04818 313 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 ATP5G1P05496 136 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 PFN1P07737 140 aaKnown RBP5.99□□□□□ -1.45
UBR1-204ENST00000563239 TMEM183BQ1AE95 376 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 SMUG1Q53HV7 270 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 SAPCD1Q5SSQ6 148 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 FAM159AQ6UWV7 190 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 TMEM183AQ8IXX5 376 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 ZC2HC1AQ96GY0 325 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 TCEAL7Q9BRU2 100 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 NDFIP1Q9BT67 221 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 NDUFAF3Q9BU61 184 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
UBR1-204ENST00000563239 DNAH2Q9P225 4427 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 TRGV1A0A0A0MS02 117 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 SCO2A0A1W2PP80 73 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 F5H768 121 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 LTAP01374 205 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 PPT1P50897 306 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 ZNF415Q09FC8 603 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 LGALS9BQ3B8N2 356 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 ALKAL2Q6UX46 152 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 FMC1Q96HJ9 113 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 MRPL16Q9NX20 251 aaKnown RBP5.98□□□□□ -1.45
UBR1-204ENST00000563239 GNG13Q9P2W3 67 aa5.98□□□□□ -1.45
UBR1-204ENST00000563239 IGKV3D-20A0A0C4DH25 116 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 AKR1C3P42330 323 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 POM121L12Q8N7R1 296 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 RASL10AQ92737 203 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 C11orf52Q96A22 123 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 SPXQ9BT56 116 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 MLST8Q9BVC4 326 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 SDF2L1Q9HCN8 221 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 MANBALQ9NQG1 85 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 ZFP30Q9Y2G7 519 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 HERC2O95714 4834 aa5.97□□□□□ -1.45
UBR1-204ENST00000563239 TRGV2A0A075B6R0 118 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 TRAV26-1A0A087WT03 109 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 FABP5P3A8MUU1 101 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 SH2D1AO60880 128 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 RNASE3P12724 160 aaKnown RBP5.96□□□□□ -1.46
UBR1-204ENST00000563239 UBE2G1P62253 170 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 ZNF674Q2M3X9 581 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 LYPD6BQ8NI32 183 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 VSIG2Q96IQ7 327 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 KCNS1Q96KK3 526 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 C9orf85Q96MD7 179 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 DERL1Q9BUN8 251 aa5.96□□□□□ -1.46
UBR1-204ENST00000563239 KRBOX1C9JBD0 128 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 M0R2P5 195 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 IGHV3-53P01767 116 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 S100A9P06702 114 aaKnown RBP5.95□□□□□ -1.46
UBR1-204ENST00000563239 BCL2P10415 239 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 OR5I1Q13606 314 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 FHL2Q14192 279 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 C15orf53Q8NAA6 179 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 NHLRC2Q8NBF2 726 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 ZNF479Q96JC4 524 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
UBR1-204ENST00000563239 A0A0J9YY99 117 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 H3BNG1 76 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 TEX46H3BTG2 121 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 IGLV2-8P01709 118 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 SFTA3P0C7M3 94 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 P0DMU3 169 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 FAM231AP0DMU4 169 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 FAM231CP0DMU5 169 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 RPL35P42766 123 aaKnown RBP5.94□□□□□ -1.46
UBR1-204ENST00000563239 MEF2BQ02080 365 aaPredicted RBP5.94□□□□□ -1.46
UBR1-204ENST00000563239 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 FAM162BQ5T6X4 162 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 BAGE2Q86Y30 109 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 PTH2Q96A98 100 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 TXNDC17Q9BRA2 123 aa5.94□□□□□ -1.46
UBR1-204ENST00000563239 FRAS1Q86XX4 4008 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms