RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 APLNQ9ULZ1 77 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 IGHV4-4A0A075B6R2 117 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 A0A0D9SG52 128 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 CTXND1A0A1B0GTU2 59 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 A0A1B0GV50 99 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 A0A1B0GVG6 124 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 KANTRA0A1W2PQU2 76 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 KLLNB2CW77 178 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 F6UZH7 168 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 BCL2L11O43521 198 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 PFDN1O60925 122 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 ZNF324O75467 553 aaPredicted RBP4.1□□□□□ -1.75
CDH13-206ENST00000562601 CXorf1O96002 111 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 MUC21Q5SSG8 566 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 ZFAND2AQ8N6M9 145 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 SUN5Q8TC36 379 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 RXFP4Q8TDU9 374 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 C16orf74Q96GX8 76 aa4.1□□□□□ -1.75
CDH13-206ENST00000562601 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 TRAV34A0A0B4J273 112 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 RBAKDNA6NC62 111 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 MAP1LC3B2A6NCE7 125 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 CBY3A6NI87 242 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 LYRM9A8MSI8 78 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GGTLC3B5MD39 225 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GAGE7O76087 117 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GAGE12FP0CL80 117 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GAGE12GP0CL81 117 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GAGE12IP0CL82 117 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 CRISP2P16562 243 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 PCP4P48539 62 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 ZNF345Q14585 488 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 LGALSLQ3ZCW2 172 aaPredicted RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 FAM74A1Q5RGS3 127 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 TMEM88Q6PEY1 159 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 EIF4E3Q8N5X7 224 aaKnown RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 RNASE8Q8TDE3 154 aaKnown RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 TMEM263Q8WUH6 116 aaKnown RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 TMED6Q8WW62 240 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 TVP23CQ96ET8 276 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 LINC00479Q96M42 142 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 C20orf144Q9BQM9 153 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 MAP1LC3BQ9GZQ8 125 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 GSN-AS1Q9NRJ2 163 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 TMEM167BQ9NRX6 74 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 NAGKQ9UJ70 344 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 EPDR1Q9UM22 224 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 KLF12Q9Y4X4 402 aa4.09□□□□□ -1.75
CDH13-206ENST00000562601 TIMM8BQ9Y5J9 83 aaPredicted RBP4.09□□□□□ -1.75
CDH13-206ENST00000562601 NACAE9PAV3 2078 aa4.09□□□□□ -1.76
CDH13-206ENST00000562601 IGHV1OR15-1A0A075B7D0 117 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TEX48A0A1B0GUV7 120 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 GAGE10A6NGK3 116 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 FAM74A7A6NL05 159 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 SNURFLB1AK76 121 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 F5H768 121 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 GNRH2O43555 120 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 IFNA7P01567 189 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TCRAP04437 139 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 ZNF493Q6ZR52 646 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 Q6ZTI0 123 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 AKAP14Q86UN6 197 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TCTE3Q8IZS6 198 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 C5orf17Q8NAS9 161 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 C11orf72Q8NBR9 251 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 PRSS3P2Q8NHM4 247 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 SFT2D1Q8WV19 159 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 PYGO2Q9BRQ0 406 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 NDUFAF3Q9BU61 184 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TREM1Q9NP99 234 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 PSG8Q9UQ74 426 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 FRAS1Q86XX4 4008 aa4.08□□□□□ -1.76
CDH13-206ENST00000562601 TRGV1A0A0A0MS02 117 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 A0A0J9YY99 117 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 A0A1W2PRE2 83 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 IGLV2-11P01706 119 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 C1QBP02746 253 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 ATP5G1P05496 136 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 NMBP08949 121 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 SEC11BP0C7V7 166 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 ATP5G3P48201 142 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 ZNF80P51504 273 aaPredicted RBP4.07□□□□□ -1.76
CDH13-206ENST00000562601 CCL20P78556 96 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 OR5I1Q13606 314 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 TMEM183BQ1AE95 376 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 ANXA2RQ3ZCQ2 193 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 CST9LP1Q5W188 147 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 LGALS9CQ6DKI2 356 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 TMEM183AQ8IXX5 376 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 LINC00467Q9BRT7 94 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 MRPL16Q9NX20 251 aaKnown RBP4.07□□□□□ -1.76
CDH13-206ENST00000562601 MDFICQ9P1T7 246 aa4.07□□□□□ -1.76
CDH13-206ENST00000562601 TRGV2A0A075B6R0 118 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 TRBV7-9A0A0J9YWB2 115 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 K7EQM0 130 aa4.06□□□□□ -1.76
CDH13-206ENST00000562601 PEX7O00628 323 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms