RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 LYPD1Q8N2G4 141 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 UTP20O75691 2785 aaKnown RBP14.47□□□□□ -0.09
RAB40C-206ENST00000561781 DSCAMO60469 2012 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 SH2D1AO60880 128 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 C8orf49Q96NF6 230 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 HIVEP3Q5T1R4 2406 aa14.47□□□□□ -0.09
RAB40C-206ENST00000561781 A0A1B0GX51 115 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 IGHG3P01860 377 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 HLA-DMBP28068 263 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 LAGE3Q14657 143 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 HCP5Q6MZN7 132 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 LINC01600Q96MT4 127 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 IGLV2-18A0A075B6J9 118 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 M0R2P5 195 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 RPL7P18124 248 aaKnown RBP14.46□□□□□ -0.09
RAB40C-206ENST00000561781 TMEM167AQ8TBQ9 72 aa14.46□□□□□ -0.09
RAB40C-206ENST00000561781 FAM19A5Q7Z5A7 132 aaPredicted RBP14.45□□□□□ -0.1
RAB40C-206ENST00000561781 BAALCQ8WXS3 180 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 C17orf77Q96MU5 243 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 SPANXCQ9NY87 97 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 USP9XQ93008 2570 aaPredicted RBP14.45□□□□□ -0.1
RAB40C-206ENST00000561781 TRBV19A0A075B6N1 114 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 NPFFO15130 113 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 NDUFA7O95182 113 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 IGKV3-15P01624 115 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 LYZP61626 148 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 TMEM155Q4W5P6 130 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 SPANXDQ9BXN6 97 aa14.45□□□□□ -0.1
RAB40C-206ENST00000561781 HELZ2Q9BYK8 2649 aaKnown RBP14.44□□□□□ -0.1
RAB40C-206ENST00000561781 LOC107984640A0A0U1RRK4 108 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 A4D1N5 150 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 TIMM23O14925 209 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 ZNF833PQ6ZTB9 187 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 OR13C6PQ8NH95 151 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 PRADC1Q9BSG0 188 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 PRO1854Q9UHT4 67 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 IGLC6P0CF74 106 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 GNLYP22749 145 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 MZT1Q08AG7 82 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 PLGLAQ15195 96 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 TIMD4Q96H15 378 aa14.44□□□□□ -0.1
RAB40C-206ENST00000561781 RPUSD1Q9UJJ7 312 aaKnown RBP14.44□□□□□ -0.1
RAB40C-206ENST00000561781 TRBV7-7A0A0K0K1E9 115 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 PLXNB1O43157 2135 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 GAS8-AS1O95177 125 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 CECR9P0C854 216 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 CFC1BP0CG36 223 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 CFC1P0CG37 223 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 C9orf153Q5TBE3 101 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 SIGLEC15Q6ZMC9 328 aa14.43□□□□□ -0.1
RAB40C-206ENST00000561781 UBR5O95071 2799 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-206ENST00000561781 CNFNQ9BYD5 112 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 GCN1Q92616 2671 aaKnown RBP14.42□□□□□ -0.1
RAB40C-206ENST00000561781 LGALS9O00182 355 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 APELAP0DMC3 54 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 CRIP2P52943 208 aaPredicted RBP14.42□□□□□ -0.1
RAB40C-206ENST00000561781 PLEKHB2Q96CS7 222 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 NGBQ9NPG2 151 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 TPSG1Q9NRR2 321 aa14.42□□□□□ -0.1
RAB40C-206ENST00000561781 FASNP49327 2511 aaKnown RBP14.41□□□□□ -0.1
RAB40C-206ENST00000561781 LRRK2Q5S007 2527 aa14.41□□□□□ -0.1
RAB40C-206ENST00000561781 COX8CQ7Z4L0 72 aa14.41□□□□□ -0.1
RAB40C-206ENST00000561781 C3orf22Q8N5N4 141 aa14.41□□□□□ -0.1
RAB40C-206ENST00000561781 FAM215AQ9Y5M1 114 aa14.41□□□□□ -0.1
RAB40C-206ENST00000561781 INTS1Q8N201 2190 aaKnown RBP14.4□□□□□ -0.1
RAB40C-206ENST00000561781 H3BMM0 161 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 LHBP01229 141 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 COX6B1P14854 86 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 RPS28P62857 69 aaKnown RBP14.4□□□□□ -0.1
RAB40C-206ENST00000561781 UBE2WQ96B02 151 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 PRR25Q96S07 402 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 VKORC1Q9BQB6 163 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 TEX49A0A1B0GTD5 131 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 FAM240AA0A1B0GVK7 77 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 M0R3E3 92 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 IGLV2-23P01705 113 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 P0DMU3 169 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 FAM231AP0DMU4 169 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 FAM231CP0DMU5 169 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 SEM1Q6ZVN7 128 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 TRPT1Q86TN4 253 aaKnown RBP14.4□□□□□ -0.1
RAB40C-206ENST00000561781 MSRB1Q9NZV6 116 aa14.4□□□□□ -0.1
RAB40C-206ENST00000561781 SPTAN1Q13813 2472 aaKnown RBP14.39□□□□□ -0.11
RAB40C-206ENST00000561781 EGR2P11161 476 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-206ENST00000561781 ATXN8Q156A1 80 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 TMEM101Q96IK0 257 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 LINC00574Q9H8X3 128 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 SLC25A16P16260 332 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 HERVK_113P63121 156 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 MSMPQ1L6U9 139 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 PVRIGQ6DKI7 326 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 DEFB108BQ8NET1 73 aa14.39□□□□□ -0.11
RAB40C-206ENST00000561781 UQCRQO14949 82 aa14.38□□□□□ -0.11
RAB40C-206ENST00000561781 GATA1P15976 413 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-206ENST00000561781 CD40P25942 277 aa14.38□□□□□ -0.11
RAB40C-206ENST00000561781 EFNA4P52798 201 aa14.38□□□□□ -0.11
RAB40C-206ENST00000561781 IMUPQ9GZP8 106 aa14.38□□□□□ -0.11
RAB40C-206ENST00000561781 SPTBN1Q01082 2364 aaKnown RBP14.38□□□□□ -0.11
RAB40C-206ENST00000561781 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
RAB40C-206ENST00000561781 ZNF56Q15929 161 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms