RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ALKBH6Q3KRA9 238 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 RPL39P5Q59GN2 51 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 GOLT1AQ6ZVE7 132 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 IL17RELQ6ZVW7 336 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 C8orf31Q8N9H6 132 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 NEXN-AS1Q8NBZ9 246 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
CDH1-203ENST00000561751 IMMP1LQ96LU5 166 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 DUX3Q96PT4 197 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 PRR25Q96S07 402 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 TTTY13Q9BZ97 58 aa5.64□□□□□ -1.51
CDH1-203ENST00000561751 IGHV1-69DA0A0B4J2H0 117 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 A0A0J9YX75 114 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 A0A0J9YY99 117 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 ZNF815PA8K554 130 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 NDUFC2-KCTD14E9PQ53 114 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 F5H768 121 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 H3BVH4 76 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 PPP1R17O96001 155 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 IGHV3-33P01772 117 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 CD3EP07766 207 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 CCL3P10147 92 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 LINC00205P59089 165 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 PCOLCEQ15113 449 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 FAM201AQ5SY85 155 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 GAGE2AQ6NT46 116 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 SCGB1D4Q6XE38 83 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 Q6ZQT7 251 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 C5orf38Q86SI9 138 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 IGFBPL1Q8WX77 278 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 TOMM6Q96B49 74 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 FAM173AQ9BQD7 235 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 SRSF8Q9BRL6 282 aaKnown RBP5.63□□□□□ -1.51
CDH1-203ENST00000561751 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
CDH1-203ENST00000561751 UNC13CQ8NB66 2214 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 PTPN13Q12923 2485 aa5.63□□□□□ -1.51
CDH1-203ENST00000561751 PTPRBP23467 1997 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 RP1P56715 2156 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 TRAV8-1A0A0A6YYK1 113 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 IGHV3-43A0A0B4J1X8 118 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 TRAV17A0A0B4J275 112 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 DEFB108AA8MXU0 73 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 K7ENP7 123 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 ATOX1O00244 68 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 TRACP01848 142 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 SAA2P0DJI9 122 aaPredicted RBP5.62□□□□□ -1.51
CDH1-203ENST00000561751 IGHV3-43DP0DP04 118 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 WT1P19544 449 aaPredicted RBP5.62□□□□□ -1.51
CDH1-203ENST00000561751 CNTFRP26992 372 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 HOXA4Q00056 320 aaPredicted RBP5.62□□□□□ -1.51
CDH1-203ENST00000561751 DEFB133Q30KQ1 61 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 SIGLEC15Q6ZMC9 328 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 ZNF833PQ6ZTB9 187 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 FLYWCH2Q96CP2 140 aaKnown RBP5.62□□□□□ -1.51
CDH1-203ENST00000561751 SHANK2-AS3Q9BTD1 123 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
CDH1-203ENST00000561751 LY6G6EA0A0G2JKS1 128 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 OVOL1O14753 267 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 SH2D1AO60880 128 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 GRPP07492 148 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 COX6CP09669 75 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 SAA1P0DJI8 122 aaPredicted RBP5.61□□□□□ -1.51
CDH1-203ENST00000561751 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
CDH1-203ENST00000561751 CFHR1Q03591 330 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 ERCC8Q13216 396 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 C17orf58Q2M2W7 97 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 ASPHD1Q5U4P2 390 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
CDH1-203ENST00000561751 CD177Q8N6Q3 437 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
CDH1-203ENST00000561751 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 CHCHD5Q9BSY4 110 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 KIAA1549Q9HCM3 1950 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 U3KQA8 63 aa5.61□□□□□ -1.51
CDH1-203ENST00000561751 TANC2Q9HCD6 1990 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 TRGV11A0A075B6L2 103 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 C17orf100A8MU93 164 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 SRRM5B3KS81 715 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 B9A039 149 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 H3BRN7 92 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 M0R381 172 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 NDUFA3O95167 84 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 PRB1P04280 392 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 PLA2G2AP14555 144 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 WT1-ASQ06250 92 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 FAM53AQ6NSI3 398 aaPredicted RBP5.6□□□□□ -1.51
CDH1-203ENST00000561751 ZNF474Q6S9Z5 364 aaPredicted RBP5.6□□□□□ -1.51
CDH1-203ENST00000561751 LINC00311Q8N616 119 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 NRACQ8N912 160 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 DPH3Q96FX2 82 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 TMEM141Q96I45 108 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 ASCL2Q99929 193 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 SLC50A1Q9BRV3 221 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
CDH1-203ENST00000561751 DKK4Q9UBT3 224 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms