RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 IQCJQ1A5X6 159 aa17.09■□□□□ 0.33
TMEM249-201ENST00000561638 NHLRC2Q8NBF2 726 aa17.09■□□□□ 0.33
TMEM249-201ENST00000561638 FAM19A4Q96LR4 140 aa17.09■□□□□ 0.33
TMEM249-201ENST00000561638 CTDSP1Q9GZU7 261 aa17.09■□□□□ 0.33
TMEM249-201ENST00000561638 AMBPP02760 352 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 PCP4P48539 62 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 COTL1Q14019 142 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 LINC00322Q6ZN03 302 aaPredicted RBP17.08■□□□□ 0.33
TMEM249-201ENST00000561638 FAM210BQ96KR6 192 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 SMIM7Q9BQ49 75 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 PRO1933Q9H354 126 aa17.08■□□□□ 0.33
TMEM249-201ENST00000561638 TRBV6-1A0A0K0K1D8 114 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 CRISP2P16562 243 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 C8orf49Q96NF6 230 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 GOLT1BQ9Y3E0 138 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 ZNF727A8MUV8 499 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 INSP01308 110 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 RNASE4P34096 147 aaKnown RBP17.07■□□□□ 0.32
TMEM249-201ENST00000561638 KIR3DS1Q14943 382 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 ZFAND2AQ8N6M9 145 aa17.07■□□□□ 0.32
TMEM249-201ENST00000561638 PHOX2AO14813 284 aa17.06■□□□□ 0.32
TMEM249-201ENST00000561638 IGF2BP2-AS1Q96M15 143 aa17.06■□□□□ 0.32
TMEM249-201ENST00000561638 HIST1H2BLQ99880 126 aa17.06■□□□□ 0.32
TMEM249-201ENST00000561638 KLLNB2CW77 178 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 TRGC1P0CF51 173 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 GFI1BQ5VTD9 330 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 BTF3L4Q96K17 158 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 TRBV20OR9-2A0A075B6H5 130 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 TRBV24-1A0A075B6N3 115 aa17.05■□□□□ 0.32
TMEM249-201ENST00000561638 GIG44P09565 113 aaPredicted RBP17.05■□□□□ 0.32
TMEM249-201ENST00000561638 TRAV12-3A0A0B4J271 114 aa17.04■□□□□ 0.32
TMEM249-201ENST00000561638 C7orf71A4D174 169 aa17.04■□□□□ 0.32
TMEM249-201ENST00000561638 COA6Q5JTJ3 125 aaKnown RBP17.04■□□□□ 0.32
TMEM249-201ENST00000561638 PRR9Q5T870 116 aa17.04■□□□□ 0.32
TMEM249-201ENST00000561638 TMEM18Q96B42 140 aa17.04■□□□□ 0.32
TMEM249-201ENST00000561638 TMEM208Q9BTX3 173 aa17.04■□□□□ 0.32
TMEM249-201ENST00000561638 PGPEP1LA6NFU8 196 aa17.03■□□□□ 0.32
TMEM249-201ENST00000561638 C9JCJ5 164 aa17.03■□□□□ 0.32
TMEM249-201ENST00000561638 CRXO43186 299 aaPredicted RBP17.03■□□□□ 0.32
TMEM249-201ENST00000561638 TRGC2P03986 189 aa17.03■□□□□ 0.32
TMEM249-201ENST00000561638 MGST1P10620 155 aaKnown RBP17.03■□□□□ 0.32
TMEM249-201ENST00000561638 DEFB135Q30KP9 77 aa17.03■□□□□ 0.32
TMEM249-201ENST00000561638 DLEU1O43261 78 aa17.02■□□□□ 0.32
TMEM249-201ENST00000561638 ERVFC1-1P60608 527 aa17.02■□□□□ 0.32
TMEM249-201ENST00000561638 MEGF8Q7Z7M0 2845 aa17.02■□□□□ 0.32
TMEM249-201ENST00000561638 IGHV3OR16-12A0A075B7B8 117 aa17.02■□□□□ 0.31
TMEM249-201ENST00000561638 PRR27Q6MZM9 219 aa17.02■□□□□ 0.31
TMEM249-201ENST00000561638 ZC2HC1AQ96GY0 325 aa17.02■□□□□ 0.31
TMEM249-201ENST00000561638 SMIM12Q96EX1 92 aa17.01■□□□□ 0.31
TMEM249-201ENST00000561638 GZMBP10144 247 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 CDPF1Q6NVV7 123 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 Q6ZWC4 215 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 RCHY1Q96PM5 261 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 CXCL1P09341 107 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 ZNF25P17030 456 aaPredicted RBP17■□□□□ 0.31
TMEM249-201ENST00000561638 SBSPONQ8IVN8 264 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 MLST8Q9BVC4 326 aa17■□□□□ 0.31
TMEM249-201ENST00000561638 TRAV21A0A0B4J279 112 aa16.99■□□□□ 0.31
TMEM249-201ENST00000561638 PFN1P07737 140 aaKnown RBP16.99■□□□□ 0.31
TMEM249-201ENST00000561638 ZNF80P51504 273 aaPredicted RBP16.99■□□□□ 0.31
TMEM249-201ENST00000561638 TMEM241Q24JQ0 296 aa16.99■□□□□ 0.31
TMEM249-201ENST00000561638 FAM162BQ5T6X4 162 aa16.99■□□□□ 0.31
TMEM249-201ENST00000561638 ZNF664Q8N3J9 261 aa16.99■□□□□ 0.31
TMEM249-201ENST00000561638 CSNK1G2-AS1Q8NCQ2 148 aa16.99■□□□□ 0.31
TMEM249-201ENST00000561638 Q6AWC8 147 aa16.98■□□□□ 0.31
TMEM249-201ENST00000561638 OCC1Q8TAD7 63 aa16.98■□□□□ 0.31
TMEM249-201ENST00000561638 LINC01587Q99440 93 aa16.98■□□□□ 0.31
TMEM249-201ENST00000561638 C20orf144Q9BQM9 153 aa16.98■□□□□ 0.31
TMEM249-201ENST00000561638 NAGKQ9UJ70 344 aa16.98■□□□□ 0.31
TMEM249-201ENST00000561638 IGLV2-8P01709 118 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 RBMY1A1P0DJD3 496 aaKnown RBP16.97■□□□□ 0.31
TMEM249-201ENST00000561638 RBMY1CP0DJD4 496 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 HTN1P15515 57 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 RBMY1FQ15415 496 aaKnown RBP16.97■□□□□ 0.31
TMEM249-201ENST00000561638 COX8CQ7Z4L0 72 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 FRZBQ92765 325 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 NAT8Q9UHE5 227 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 PDZD11Q5EBL8 140 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 Q6ZQT7 251 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 TMEM256Q8N2U0 113 aa16.97■□□□□ 0.31
TMEM249-201ENST00000561638 NBEAL2Q6ZNJ1 2754 aa16.96■□□□□ 0.31
TMEM249-201ENST00000561638 TGIF2-C20orf24A0A0A6YYL0 155 aa16.96■□□□□ 0.31
TMEM249-201ENST00000561638 FABP5P3A8MUU1 101 aa16.96■□□□□ 0.31
TMEM249-201ENST00000561638 H7BYZ3 331 aa16.96■□□□□ 0.31
TMEM249-201ENST00000561638 C1orf158Q8N1D5 194 aa16.96■□□□□ 0.31
TMEM249-201ENST00000561638 SPRY2O43597 315 aa16.95■□□□□ 0.3
TMEM249-201ENST00000561638 ZNF324O75467 553 aaPredicted RBP16.95■□□□□ 0.3
TMEM249-201ENST00000561638 MUC21Q5SSG8 566 aa16.95■□□□□ 0.3
TMEM249-201ENST00000561638 LY96Q9Y6Y9 160 aa16.95■□□□□ 0.3
TMEM249-201ENST00000561638 ZNF705GA8MUZ8 300 aaPredicted RBP16.94■□□□□ 0.3
TMEM249-201ENST00000561638 SH2D1AO60880 128 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 G0S2P27469 103 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 OR5I1Q13606 314 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 ADIRFQ15847 76 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 FAM159AQ6UWV7 190 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 LINC01551Q86U37 167 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 RNF183Q96D59 192 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 DAZAP1Q96EP5 407 aaKnown RBP16.94■□□□□ 0.3
TMEM249-201ENST00000561638 B9D2Q9BPU9 175 aa16.94■□□□□ 0.3
TMEM249-201ENST00000561638 CRIP1P50238 77 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms