RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CLEC2DQ9UHP7 191 aa2.11□□□□□ -2.07
HERC1-215ENST00000561436 KLF12Q9Y4X4 402 aa2.11□□□□□ -2.07
HERC1-215ENST00000561436 HLA-DRB4X5D2U9 266 aa2.11□□□□□ -2.07
HERC1-215ENST00000561436 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
HERC1-215ENST00000561436 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 DEFB4AO15263 64 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 OR7C2O60412 319 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 PTTG1O95997 202 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 MT-CO2P00403 227 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 CFDP00746 253 aaPredicted RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 PPYP01298 95 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 IFNA5P01569 189 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 S100A9P06702 114 aaKnown RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 NFYAP23511 347 aaPredicted RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 SNCAP37840 140 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 PSMB3P49720 205 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 HSPE1P61604 102 aaKnown RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 DAD1P61803 113 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 PRCDQ00LT1 54 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 MLLT11Q13015 90 aaPredicted RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 VAMP3Q15836 100 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 RRN3P1Q2M238 152 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 TDRG1Q3Y452 100 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 ACTL10Q5JWF8 245 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 IDNKQ5T6J7 187 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 C8orf59Q8N0T1 100 aaPredicted RBP2.1□□□□□ -2.07
HERC1-215ENST00000561436 ORMDL3Q8N138 153 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 DEFB104AQ8WTQ1 72 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 Q8WTZ3 238 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 C18orf15Q96N68 181 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 TMEM70Q9BUB7 260 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 SCRT1Q9BWW7 348 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 SCN3BQ9NY72 215 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 RABAC1Q9UI14 185 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 V9GYY9 64 aa2.1□□□□□ -2.07
HERC1-215ENST00000561436 IGHV6-1A0A0B4J1U7 121 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 TRDV1A0A1B0GX56 115 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 ZNF98A6NK75 572 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 A8MTW9 85 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 SULT1C2O00338 296 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 ISLRO14498 428 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 PGLYRP1O75594 196 aaPredicted RBP2.09□□□□□ -2.07
HERC1-215ENST00000561436 ATP5G1P05496 136 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 FABP1P07148 127 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 ATP5G3P48201 142 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 GNG2P59768 71 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 PSG9Q00887 426 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 DHRS2Q13268 280 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 PSMG4Q5JS54 123 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 AADACL3Q5VUY0 350 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 EBLN2Q6P2I7 272 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 SFXN4Q6P4A7 337 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 SPINT4Q6UDR6 99 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 TMEM91Q6ZNR0 172 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 SLC35G3Q8N808 338 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 LGALS14Q8TCE9 139 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 RNASEH2CQ8TDP1 164 aaKnown RBP2.09□□□□□ -2.07
HERC1-215ENST00000561436 CYGBQ8WWM9 190 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 PYDC1Q8WXC3 89 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 IGF2BP2-AS1Q96M15 143 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 C20orf144Q9BQM9 153 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 ATG5Q9H1Y0 275 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 TAS2R8Q9NYW2 309 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 LSM2Q9Y333 95 aaKnown RBP2.09□□□□□ -2.07
HERC1-215ENST00000561436 TPRKBQ9Y3C4 175 aa2.09□□□□□ -2.07
HERC1-215ENST00000561436 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
HERC1-215ENST00000561436 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 IGKV3-7A0A075B6H7 116 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 TRAV3A0A0B4J244 114 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 FAM240AA0A1B0GVK7 77 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 ANKRD20A5PA0PJZ0 165 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 KNCNA6PVL3 124 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 GPR31O00270 319 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 KRASP01116 189 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 RD3LP0DJH9 198 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 M6PRP20645 277 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 HTR2BP41595 481 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 OR10A3P58181 314 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 FLI1Q01543 452 aaPredicted RBP2.08□□□□□ -2.08
HERC1-215ENST00000561436 BSXQ3C1V8 233 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 Q5VSD8 79 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 ZNF818PQ6ZRF7 136 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 AHSA2Q719I0 299 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 SSX7Q7RTT5 188 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 S100A7AQ86SG5 101 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 OR4C16Q8NGL9 310 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 OR51H1Q8NH63 302 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 LRRC20Q8TCA0 184 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 ORAOV1Q8WV07 137 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 TMEM203Q969S6 136 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 MGLLQ99685 303 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 C7orf50Q9BRJ6 194 aaKnown RBP2.08□□□□□ -2.08
HERC1-215ENST00000561436 PDCD10Q9BUL8 212 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 HINT2Q9BX68 163 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 DUSP21Q9H596 190 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 ENY2Q9NPA8 101 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 RPRMQ9NS64 109 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms