RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 C11orf21Q9P2W6 132 aa7.38□□□□□ -1.23
LRRC28-221ENST00000561276 NAGKQ9UJ70 344 aa7.38□□□□□ -1.23
LRRC28-221ENST00000561276 PLAC8L1A1L4L8 177 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 MGST1P10620 155 aaKnown RBP7.37□□□□□ -1.23
LRRC28-221ENST00000561276 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 FAM162BQ5T6X4 162 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 OCC1Q8TAD7 63 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 RNASE8Q8TDE3 154 aaKnown RBP7.37□□□□□ -1.23
LRRC28-221ENST00000561276 TMEM263Q8WUH6 116 aaKnown RBP7.37□□□□□ -1.23
LRRC28-221ENST00000561276 KCNS1Q96KK3 526 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 TGP01266 2768 aa7.37□□□□□ -1.23
LRRC28-221ENST00000561276 TENM3Q9P273 2699 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 PRKDCP78527 4128 aaKnown RBP7.36□□□□□ -1.23
LRRC28-221ENST00000561276 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 C9JCJ5 164 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 SH2D1AO60880 128 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 ORM1P02763 201 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 PRR27Q6MZM9 219 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 C11orf72Q8NBR9 251 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 SMIM12Q96EX1 92 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 SMIM7Q9BQ49 75 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 GSN-AS1Q9NRJ2 163 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 MDFICQ9P1T7 246 aa7.36□□□□□ -1.23
LRRC28-221ENST00000561276 TIMM8BQ9Y5J9 83 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-221ENST00000561276 IGKV3D-20A0A0C4DH25 116 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 CXorf65A6NEN9 183 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 SNURFLB1AK76 121 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 M0R036 132 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 TYMSP04818 313 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 OR5I1Q13606 314 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 IL17DQ8TAD2 202 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 DKK2Q9UBU2 259 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 CELA1Q9UNI1 258 aa7.35□□□□□ -1.23
LRRC28-221ENST00000561276 TRGV11A0A075B6L2 103 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 B4DEV8 164 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 K7EN84 100 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 TCL1AP56279 114 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 TMEM241Q24JQ0 296 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 IBA57Q5T440 356 aaKnown RBP7.34□□□□□ -1.23
LRRC28-221ENST00000561276 ZNF575Q86XF7 245 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 DAZAP1Q96EP5 407 aaKnown RBP7.34□□□□□ -1.23
LRRC28-221ENST00000561276 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
LRRC28-221ENST00000561276 BIN3Q9NQY0 253 aa7.34□□□□□ -1.23
LRRC28-221ENST00000561276 TMSB15BA0A087X1C1 80 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 IGHV3-16A0A0C4DH30 117 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 LINC00862A6NCI5 91 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 LYRM9A8MSI8 78 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 NANOS2P60321 138 aaKnown RBP7.33□□□□□ -1.24
LRRC28-221ENST00000561276 ZNF415Q09FC8 603 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 DAZ2Q13117 558 aaKnown RBP7.33□□□□□ -1.24
LRRC28-221ENST00000561276 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 SOHLH1Q5JUK2 328 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 SPXQ9BT56 116 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 LY96Q9Y6Y9 160 aa7.33□□□□□ -1.24
LRRC28-221ENST00000561276 HUWE1Q7Z6Z7 4374 aaKnown RBP7.33□□□□□ -1.24
LRRC28-221ENST00000561276 GRIFINA4D1Z8 144 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 C19orf71A6NCJ1 209 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 DEFB130BP0DP73 79 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 DEFB130AP0DP74 79 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 DAD1P61803 113 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 RPL19P84098 196 aaKnown RBP7.32□□□□□ -1.24
LRRC28-221ENST00000561276 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 NUDT10Q8NFP7 164 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
LRRC28-221ENST00000561276 TEX48A0A1B0GUV7 120 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 SPINK4O60575 86 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 P01737 135 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 SFTA3P0C7M3 94 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 RNASE3P12724 160 aaKnown RBP7.31□□□□□ -1.24
LRRC28-221ENST00000561276 S100A4P26447 101 aaKnown RBP7.31□□□□□ -1.24
LRRC28-221ENST00000561276 ASIPP42127 132 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 LGALS9BQ3B8N2 356 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 DNLZQ5SXM8 178 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 UQCC3Q6UW78 93 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 Q6ZTI0 123 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 COMMD7Q86VX2 200 aa7.31□□□□□ -1.24
LRRC28-221ENST00000561276 RNASE7Q9H1E1 156 aaKnown RBP7.31□□□□□ -1.24
LRRC28-221ENST00000561276 MUC4Q99102 2169 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 GAGE7O76087 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 ARMS2P0C7Q2 107 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 GAGE12FP0CL80 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 GAGE12GP0CL81 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 GAGE12IP0CL82 117 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 ERVFC1-1P60608 527 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 RPL23P62829 140 aaKnown RBP7.3□□□□□ -1.24
LRRC28-221ENST00000561276 Q6ZTC4 211 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 LINC00612Q8N6U2 182 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 OR2D3Q8NGH3 330 aa7.3□□□□□ -1.24
LRRC28-221ENST00000561276 MUC7Q8TAX7 377 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms