RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 COL5A1-AS1Q5SY13 56 aa5.12□□□□□ -1.59
SPG11-224ENST00000561268 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
SPG11-224ENST00000561268 SPAG8Q99932 426 aaPredicted RBP5.12□□□□□ -1.59
SPG11-224ENST00000561268 UFC1Q9Y3C8 167 aa5.12□□□□□ -1.59
SPG11-224ENST00000561268 ALMS1Q8TCU4 4167 aa5.12□□□□□ -1.59
SPG11-224ENST00000561268 IGKV1D-37A0A075B6S9 117 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 TRAV30A0A087WSZ9 112 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 C19orf71A6NCJ1 209 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 PGPEP1LA6NFU8 196 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 ZNF705FA8MVS1 300 aaPredicted RBP5.11□□□□□ -1.59
SPG11-224ENST00000561268 OR11H12B2RN74 326 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 DIRC3C9JPN6 131 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 K7EMT4 169 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 SLC17A3O00476 420 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 HYPMO75409 117 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 CLEC3BP05452 202 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 CTSGP08311 255 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 ZNF705DP0CH99 300 aaPredicted RBP5.11□□□□□ -1.59
SPG11-224ENST00000561268 ZNF705BP0CI00 300 aaPredicted RBP5.11□□□□□ -1.59
SPG11-224ENST00000561268 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 AMTP48728 403 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 UBE2G1P62253 170 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 HBBP68871 147 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 ODF3L2Q3SX64 289 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 TM4SF20Q53R12 229 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 PET117Q6UWS5 81 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 WFDC3Q8IUB2 231 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 DEFB125Q8N687 156 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 NUP35Q8NFH5 326 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 OR2D3Q8NGH3 330 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 C18orf32Q8TCD1 76 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 BORCS7Q96B45 105 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 TXN2Q99757 166 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 NRN1Q9NPD7 142 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 OTORQ9NRC9 128 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 C21orf62Q9NYP8 219 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 ZFP30Q9Y2G7 519 aa5.11□□□□□ -1.59
SPG11-224ENST00000561268 OR2T8A6NH00 312 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 DLEU1O43261 78 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 NUPR1O60356 82 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 HSBP1O75506 76 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 SCGB2A1O75556 95 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 NBEAP1P0C6P0 100 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 RPS20P60866 119 aaKnown RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 MAJINQ3KP22 176 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 SAPCD1Q5SSQ6 148 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 PATE2Q6UY27 113 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 LINC00305Q7Z4B0 112 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 NIT1Q86X76 327 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 Q8N976 141 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 TMEM75Q8N9X5 138 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 NUDT10Q8NFP7 164 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 NUDT11Q96G61 164 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 ALKBH7Q9BT30 221 aaPredicted RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 RNASE7Q9H1E1 156 aaKnown RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 RPP21Q9H633 154 aaKnown RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 FNDC4Q9H6D8 234 aaPredicted RBP5.1□□□□□ -1.59
SPG11-224ENST00000561268 ST20Q9HBF5 79 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 RETNQ9HD89 108 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 TP53TG1Q9Y2A0 90 aa5.1□□□□□ -1.59
SPG11-224ENST00000561268 TRAV9-2A0A087WT02 112 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 GRIFINA4D1Z8 144 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 K7EQM0 130 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 EREGO14944 169 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 TCRAP04437 139 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 IGLC2P0DOY2 106 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 IGLC3P0DOY3 106 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 SRIP30626 198 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 KIR2DL5BQ8NHK3 375 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 ORAOV1Q8WV07 137 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 NPIPB3Q92617 1050 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 HINT2Q9BX68 163 aa5.09□□□□□ -1.59
SPG11-224ENST00000561268 LOC102724200A0A096LPH7 203 aaPredicted RBP5.08□□□□□ -1.6
SPG11-224ENST00000561268 TRAV2A0A0B4J234 112 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 IGHV3-35A0A0C4DH35 117 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 IGHV7-4-1A0A0J9YVY3 117 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 HIGD1CA8MV81 97 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 CHEK1O14757 476 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 CIDEAO60543 219 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 P01737 135 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 C3orf79P0CE67 100 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 MGST1P10620 155 aaKnown RBP5.08□□□□□ -1.6
SPG11-224ENST00000561268 MFAP4P55083 255 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 SPATA45Q537H7 98 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 ZNF493Q6ZR52 646 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 BPIFA4PQ86YQ2 179 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 PMCHL2Q9BQD1 86 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 OVOL2Q9BRP0 275 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 TMEM70Q9BUB7 260 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 MS4A6AQ9H2W1 248 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 SMPXQ9UHP9 88 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 HIGD1AQ9Y241 93 aa5.08□□□□□ -1.6
SPG11-224ENST00000561268 IGHV3-21A0A0B4J1V1 117 aa5.07□□□□□ -1.6
SPG11-224ENST00000561268 OR4C46A6NHA9 309 aa5.07□□□□□ -1.6
SPG11-224ENST00000561268 SLC25A5P05141 298 aaKnown RBP5.07□□□□□ -1.6
SPG11-224ENST00000561268 SNRPCP09234 159 aaKnown RBP5.07□□□□□ -1.6
SPG11-224ENST00000561268 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms