RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 Q86TA4 180 aa9.73□□□□□ -0.85
TPM1-230ENST00000561266 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
TPM1-230ENST00000561266 GCGP01275 180 aa9.72□□□□□ -0.85
TPM1-230ENST00000561266 FAM159AQ6UWV7 190 aa9.72□□□□□ -0.85
TPM1-230ENST00000561266 ZNF575Q86XF7 245 aa9.72□□□□□ -0.85
TPM1-230ENST00000561266 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 K7EQM0 130 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 SMUG1Q53HV7 270 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 POM121L12Q8N7R1 296 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 HIST1H2BAQ96A08 127 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 ZC2HC1AQ96GY0 325 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 FAM210BQ96KR6 192 aa9.71□□□□□ -0.86
TPM1-230ENST00000561266 NKX6-2Q9C056 277 aaPredicted RBP9.71□□□□□ -0.86
TPM1-230ENST00000561266 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 A0A0J9YY99 117 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 PFN1P07737 140 aaKnown RBP9.7□□□□□ -0.86
TPM1-230ENST00000561266 OR5I1Q13606 314 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 C18orf15Q96N68 181 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 NDFIP1Q9BT67 221 aa9.7□□□□□ -0.86
TPM1-230ENST00000561266 TRAV26-1A0A087WT03 109 aa9.69□□□□□ -0.86
TPM1-230ENST00000561266 RAB5CP51148 216 aa9.69□□□□□ -0.86
TPM1-230ENST00000561266 SAPCD1Q5SSQ6 148 aa9.69□□□□□ -0.86
TPM1-230ENST00000561266 ALKAL2Q6UX46 152 aa9.69□□□□□ -0.86
TPM1-230ENST00000561266 GNG13Q9P2W3 67 aa9.69□□□□□ -0.86
TPM1-230ENST00000561266 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 FBLL1A6NHQ2 334 aaKnown RBP9.68□□□□□ -0.86
TPM1-230ENST00000561266 NUDT3O95989 172 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 LTAP01374 205 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 SFTA3P0C7M3 94 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 LGALS9BQ3B8N2 356 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 COX8CQ7Z4L0 72 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 NHLRC2Q8NBF2 726 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 FRAS1Q86XX4 4008 aa9.68□□□□□ -0.86
TPM1-230ENST00000561266 DNAH10Q8IVF4 4471 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 RNASE3P12724 160 aaKnown RBP9.67□□□□□ -0.86
TPM1-230ENST00000561266 AKR1C3P42330 323 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 PPT1P50897 306 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 FHL2Q14192 279 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 EIF5AL1Q6IS14 154 aaKnown RBP9.67□□□□□ -0.86
TPM1-230ENST00000561266 RASL10AQ92737 203 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 FMC1Q96HJ9 113 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 ZNF479Q96JC4 524 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 C9orf85Q96MD7 179 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 DERL1Q9BUN8 251 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 SDF2L1Q9HCN8 221 aa9.67□□□□□ -0.86
TPM1-230ENST00000561266 FABP5P3A8MUU1 101 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 SH2D1AO60880 128 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 P0DMU3 169 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 UBE2G1P62253 170 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 TCEAL7Q9BRU2 100 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 SPXQ9BT56 116 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 ZFP30Q9Y2G7 519 aa9.66□□□□□ -0.86
TPM1-230ENST00000561266 PGPEP1LA6NFU8 196 aa9.65□□□□□ -0.86
TPM1-230ENST00000561266 M0R2P5 195 aa9.65□□□□□ -0.86
TPM1-230ENST00000561266 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
TPM1-230ENST00000561266 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
TPM1-230ENST00000561266 MANBALQ9NQG1 85 aa9.65□□□□□ -0.86
TPM1-230ENST00000561266 KRBOX1C9JBD0 128 aa9.64□□□□□ -0.87
TPM1-230ENST00000561266 M0R036 132 aa9.64□□□□□ -0.87
TPM1-230ENST00000561266 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
TPM1-230ENST00000561266 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
TPM1-230ENST00000561266 IGLV2-18A0A075B6J9 118 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 A0A096LPF7 62 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 RAB19A4D1S5 217 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 C9JCJ5 164 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 M0R2N4 97 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 RPL35P42766 123 aaKnown RBP9.63□□□□□ -0.87
TPM1-230ENST00000561266 CRYBA4P53673 196 aa9.63□□□□□ -0.87
TPM1-230ENST00000561266 TMSB15BA0A087X1C1 80 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 B4DEV8 164 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 ORM1P02763 201 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 RPL19P84098 196 aaKnown RBP9.62□□□□□ -0.87
TPM1-230ENST00000561266 ESRGQ1W209 222 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 RNF212Q495C1 297 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 ZNF506Q5JVG8 444 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 BAGE2Q86Y30 109 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 UBE2DNLQ8IWF7 75 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 LYPD6BQ8NI32 183 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 JPT2Q9H910 190 aa9.62□□□□□ -0.87
TPM1-230ENST00000561266 EPPK1P58107 5090 aaKnown RBP9.61□□□□□ -0.87
TPM1-230ENST00000561266 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 H3BNG1 76 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 RS1O15537 224 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 PAX4O43316 350 aa9.61□□□□□ -0.87
TPM1-230ENST00000561266 BCL2P10415 239 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms