RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 ORM1P02763 201 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 EVI2AP22794 236 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 ACOT6Q3I5F7 207 aaPredicted RBP18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 FAM74A1Q5RGS3 127 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 IQCF2Q8IXL9 164 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 NHLRC2Q8NBF2 726 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 TREM1Q9NP99 234 aa18.32■□□□□ 0.52
SNRPA1-215ENST00000561187 M0R2P5 195 aa18.31■□□□□ 0.52
SNRPA1-215ENST00000561187 TMED6Q8WW62 240 aa18.31■□□□□ 0.52
SNRPA1-215ENST00000561187 TXNDC17Q9BRA2 123 aa18.31■□□□□ 0.52
SNRPA1-215ENST00000561187 TRAV21A0A0B4J279 112 aa18.3■□□□□ 0.52
SNRPA1-215ENST00000561187 EPM2AB3EWF7 344 aa18.3■□□□□ 0.52
SNRPA1-215ENST00000561187 CRYGDP07320 174 aa18.29■□□□□ 0.52
SNRPA1-215ENST00000561187 KRTAP10-1P60331 282 aa18.29■□□□□ 0.52
SNRPA1-215ENST00000561187 TDRG1Q3Y452 100 aa18.29■□□□□ 0.52
SNRPA1-215ENST00000561187 PQLC2Q6ZP29 291 aa18.29■□□□□ 0.52
SNRPA1-215ENST00000561187 SDF2L1Q9HCN8 221 aa18.29■□□□□ 0.52
SNRPA1-215ENST00000561187 PPT1P50897 306 aa18.28■□□□□ 0.52
SNRPA1-215ENST00000561187 CDPF1Q6NVV7 123 aa18.28■□□□□ 0.52
SNRPA1-215ENST00000561187 ARL14EPLP0DKL9 152 aa18.27■□□□□ 0.52
SNRPA1-215ENST00000561187 XGP55808 180 aa18.27■□□□□ 0.52
SNRPA1-215ENST00000561187 OR10G9Q8NGN4 311 aa18.27■□□□□ 0.52
SNRPA1-215ENST00000561187 OR10G7Q8NGN6 311 aa18.27■□□□□ 0.52
SNRPA1-215ENST00000561187 HERC1Q15751 4861 aa18.26■□□□□ 0.51
SNRPA1-215ENST00000561187 DEFA1P59665 94 aa18.26■□□□□ 0.51
SNRPA1-215ENST00000561187 DEFA3P59666 94 aa18.26■□□□□ 0.51
SNRPA1-215ENST00000561187 ASB13Q8WXK3 278 aa18.26■□□□□ 0.51
SNRPA1-215ENST00000561187 IGHV3-73A0A0B4J1V6 119 aa18.25■□□□□ 0.51
SNRPA1-215ENST00000561187 HAMPP81172 84 aa18.25■□□□□ 0.51
SNRPA1-215ENST00000561187 HSD17B11Q8NBQ5 300 aa18.25■□□□□ 0.51
SNRPA1-215ENST00000561187 GATA1P15976 413 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-215ENST00000561187 CDC34P49427 236 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-215ENST00000561187 TMEM75Q8N9X5 138 aa18.24■□□□□ 0.51
SNRPA1-215ENST00000561187 FBLL1A6NHQ2 334 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-215ENST00000561187 ZNF80P51504 273 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-215ENST00000561187 NDFIP1Q9BT67 221 aa18.23■□□□□ 0.51
SNRPA1-215ENST00000561187 C11orf21Q9P2W6 132 aa18.23■□□□□ 0.51
SNRPA1-215ENST00000561187 DPPA3Q6W0C5 159 aa18.22■□□□□ 0.51
SNRPA1-215ENST00000561187 KCNS1Q96KK3 526 aa18.22■□□□□ 0.51
SNRPA1-215ENST00000561187 A6NHS1 94 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 PSCAO43653 123 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 ZNF876PQ49A33 203 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 Q5VSD8 79 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 C10orf126Q8N4M7 172 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 Q9HAA7 133 aa18.21■□□□□ 0.51
SNRPA1-215ENST00000561187 IGHV3-38A0A0C4DH36 116 aa18.2■□□□□ 0.5
SNRPA1-215ENST00000561187 SLC25A29Q8N8R3 303 aa18.2■□□□□ 0.5
SNRPA1-215ENST00000561187 ALG5Q9Y673 324 aa18.2■□□□□ 0.5
SNRPA1-215ENST00000561187 GCGP01275 180 aa18.19■□□□□ 0.5
SNRPA1-215ENST00000561187 SMR3BP02814 79 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-215ENST00000561187 OR10J3Q5JRS4 329 aa18.19■□□□□ 0.5
SNRPA1-215ENST00000561187 VPS13BQ7Z7G8 4022 aa18.19■□□□□ 0.5
SNRPA1-215ENST00000561187 K7EP13 123 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 IGHV3-30P01768 117 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 IGHV3-33P01772 117 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 TCRAP04437 139 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 STAG3L2P0CL84 134 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 STAG3L3P0CL85 134 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 INAFM2P0DMQ5 153 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 IGHV3-30-3P0DP02 117 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 IGHV3-30-5P0DP03 117 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 GCHFRP30047 84 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 CFAP126Q5VTH2 177 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 C5orf17Q8NAS9 161 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 RAB24Q969Q5 203 aa18.18■□□□□ 0.5
SNRPA1-215ENST00000561187 GCSHP23434 173 aa18.17■□□□□ 0.5
SNRPA1-215ENST00000561187 SH2D6Q7Z4S9 175 aa18.17■□□□□ 0.5
SNRPA1-215ENST00000561187 PRNTQ86SH4 94 aa18.17■□□□□ 0.5
SNRPA1-215ENST00000561187 ARL6IP6Q8N6S5 226 aa18.17■□□□□ 0.5
SNRPA1-215ENST00000561187 PSG8Q9UQ74 426 aa18.17■□□□□ 0.5
SNRPA1-215ENST00000561187 RS1O15537 224 aa18.16■□□□□ 0.5
SNRPA1-215ENST00000561187 ATP6V0CP27449 155 aa18.16■□□□□ 0.5
SNRPA1-215ENST00000561187 FRZBQ92765 325 aa18.16■□□□□ 0.5
SNRPA1-215ENST00000561187 PRADC1Q9BSG0 188 aa18.16■□□□□ 0.5
SNRPA1-215ENST00000561187 SH3BGRL3Q9H299 93 aa18.16■□□□□ 0.5
SNRPA1-215ENST00000561187 IGLV5-52A0A0A0MRZ9 124 aa18.15■□□□□ 0.5
SNRPA1-215ENST00000561187 GGTLC3B5MD39 225 aa18.15■□□□□ 0.5
SNRPA1-215ENST00000561187 RHOHQ15669 191 aa18.15■□□□□ 0.5
SNRPA1-215ENST00000561187 LINC01556Q5JQF7 62 aa18.15■□□□□ 0.5
SNRPA1-215ENST00000561187 ZNF506Q5JVG8 444 aa18.15■□□□□ 0.5
SNRPA1-215ENST00000561187 TRAV8-6A0A0B4J262 113 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 PGPEP1LA6NFU8 196 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 K7EQM0 130 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 SUMO1P63165 101 aaKnown RBP18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 ZFP69Q49AA0 526 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 OR2G3Q8NGZ4 309 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 C9orf85Q96MD7 179 aa18.14■□□□□ 0.49
SNRPA1-215ENST00000561187 SERTM2A0A1B0GWG4 89 aa18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 TAAR5O14804 337 aa18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 IGLV2-11P01706 119 aa18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 PFN1P07737 140 aaKnown RBP18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 TIRAPP58753 221 aa18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 FLI1Q01543 452 aaPredicted RBP18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 DMBT1Q9UGM3 2413 aaPredicted RBP18.13■□□□□ 0.49
SNRPA1-215ENST00000561187 SMUG1Q53HV7 270 aa18.12■□□□□ 0.49
SNRPA1-215ENST00000561187 Q8N3U1 123 aa18.12■□□□□ 0.49
SNRPA1-215ENST00000561187 MYCBP2O75592 4640 aa18.12■□□□□ 0.49
SNRPA1-215ENST00000561187 LRCOL1A6NCL2 159 aa18.11■□□□□ 0.49
SNRPA1-215ENST00000561187 CYB561D1Q8N8Q1 229 aa18.11■□□□□ 0.49
SNRPA1-215ENST00000561187 PSMG3Q9BT73 122 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms