RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZNF674Q2M3X9 581 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 LGALS9BQ3B8N2 356 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 ZNF506Q5JVG8 444 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 Q6ZTC4 211 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 SMIM12Q96EX1 92 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 ZC2HC1AQ96GY0 325 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 NOP10Q9NPE3 64 aaKnown RBP6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 GSN-AS1Q9NRJ2 163 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.31
RABGGTA-221ENST00000561055 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 SPINK4O60575 86 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 RPL35P42766 123 aaKnown RBP6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 TCTAP57738 103 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 DAD1P61803 113 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 MUC21Q5SSG8 566 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 DNLZQ5SXM8 178 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 ZFAND6Q6FIF0 208 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 BAGE2Q86Y30 109 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 SPXQ9BT56 116 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 DERL1Q9BUN8 251 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 SDF2L1Q9HCN8 221 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 KLK5Q9Y337 293 aaPredicted RBP6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 STARD9Q9P2P6 4700 aa6.83□□□□□ -1.32
RABGGTA-221ENST00000561055 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 IGHV3-16A0A0C4DH30 117 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 GNRH2O43555 120 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 IGLV2-8P01709 118 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 TYMSP04818 313 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 FAM162BQ5T6X4 162 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 RASL10AQ92737 203 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 PTH2Q96A98 100 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 FAM210BQ96KR6 192 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 MED9Q9NWA0 146 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 MDFICQ9P1T7 246 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 SACSQ9NZJ4 4579 aa6.82□□□□□ -1.32
RABGGTA-221ENST00000561055 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 SH2D1AO60880 128 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 Q6ZTI0 123 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 ZNF767PQ75MW2 155 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 ZNF575Q86XF7 245 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
RABGGTA-221ENST00000561055 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 KRBOX1C9JBD0 128 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 C9JCJ5 164 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 ATP5G1P05496 136 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 CXCL1P09341 107 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 CENPWQ5EE01 88 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 TOR2AQ5JU69 321 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 C9orf85Q96MD7 179 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 NDUFAF3Q9BU61 184 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 EIF5A2Q9GZV4 153 aaKnown RBP6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 NAGKQ9UJ70 344 aa6.8□□□□□ -1.32
RABGGTA-221ENST00000561055 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 M0R2P5 195 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 GAGE7O76087 117 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 ORM1P02763 201 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 GNG4P50150 75 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 IFITM2Q01629 132 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 PIK3CD-AS1Q5SR53 167 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 PARLQ9H300 379 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 BIN3Q9NQY0 253 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 IL36BQ9NZH7 164 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
RABGGTA-221ENST00000561055 TRGV1A0A0A0MS02 117 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 B4DEV8 164 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 SRP19P09132 144 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 CLLU1Q5K131 121 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 NHLRC2Q8NBF2 726 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 PCNPQ8WW12 178 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 APLNQ9ULZ1 77 aa6.78□□□□□ -1.32
RABGGTA-221ENST00000561055 TRGV2A0A075B6R0 118 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 IGHV4-4A0A075B6R2 117 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 IGLL5B9A064 214 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 H3BNG1 76 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 CIDEAO60543 219 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 RAB14P61106 215 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 PEA15Q15121 130 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 OCC1Q8TAD7 63 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 SCRT2Q9NQ03 307 aa6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
RABGGTA-221ENST00000561055 PGPEP1LA6NFU8 196 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 M0R036 132 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 HOXA5P20719 270 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 ASIPP42127 132 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 ZNF876PQ49A33 203 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 FAM74A3Q4VXF1 159 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
RABGGTA-221ENST00000561055 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms