RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 MPC1Q9Y5U8 109 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 TNRC18O15417 2968 aaPredicted RBP1.18□□□□□ -2.22
HMG20A-211ENST00000560867 STRCQ7RTU9 1775 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 TMEM2Q9UHN6 1383 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 GCN1Q92616 2671 aaKnown RBP1.18□□□□□ -2.22
HMG20A-211ENST00000560867 MYO5AQ9Y4I1 1855 aaKnown RBP1.18□□□□□ -2.22
HMG20A-211ENST00000560867 PTPRMP28827 1452 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 GRIN2AQ12879 1464 aa1.18□□□□□ -2.22
HMG20A-211ENST00000560867 TECTAO75443 2155 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 SMG6Q86US8 1419 aaKnown RBP1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ERBINQ96RT1 1412 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 LAMB4A4D0S4 1761 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 TRAV14DV4A0A0A6YYC5 116 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 IGHV1-24A0A0C4DH33 117 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 LOC107984156A0A0G2JMH3 177 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 C3orf85A0A1B0GTC6 90 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 SPAARA0A1B0GVQ0 90 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 F6UZH7 168 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 M0R2P5 195 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 CORTO00230 105 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 APODP05090 189 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 CD2P06729 351 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 PYYP10082 97 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 CXCL8P10145 99 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 MEIG1Q5JSS6 88 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ZCCHC23Q6ZST2 131 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ARL17AQ8IVW1 177 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ODF3Q96PU9 254 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 SAR1AQ9NR31 198 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ASH1LQ9NR48 2969 aaKnown RBP1.17□□□□□ -2.22
HMG20A-211ENST00000560867 SCN3BQ9NY72 215 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 CCDC167Q9P0B6 97 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 COL6A3P12111 3177 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 MYH10P35580 1976 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ARFGEF3Q5TH69 2177 aa1.17□□□□□ -2.22
HMG20A-211ENST00000560867 ZFHX4Q86UP3 3567 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 FAM208BQ5VWN6 2430 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 SPG11Q96JI7 2443 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 SZT2Q5T011 3432 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 ANKHD1Q8IWZ3 2542 aaKnown RBP1.16□□□□□ -2.22
HMG20A-211ENST00000560867 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 CCDC179H3BU77 68 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 RNASE3P12724 160 aaKnown RBP1.16□□□□□ -2.22
HMG20A-211ENST00000560867 BRS3P32247 399 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 GUCA1AP43080 201 aaPredicted RBP1.16□□□□□ -2.22
HMG20A-211ENST00000560867 MIC13Q5XKP0 118 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 C2orf82Q6UX34 121 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 ATP11AUNQ6ZP68 121 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 ATOH7Q8N100 152 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 TCTEX1D1Q8N7M0 179 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 C15orf53Q8NAA6 179 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 C14orf144Q96I85 54 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 CIB3Q96Q77 187 aaPredicted RBP1.16□□□□□ -2.22
HMG20A-211ENST00000560867 REG4Q9BYZ8 158 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 MBD5Q9P267 1494 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 CEP250Q9BV73 2442 aa1.16□□□□□ -2.22
HMG20A-211ENST00000560867 FGD6Q6ZV73 1430 aa1.15□□□□□ -2.22
HMG20A-211ENST00000560867 SPTBN4Q9H254 2564 aa1.15□□□□□ -2.22
HMG20A-211ENST00000560867 VCANP13611 3396 aa1.15□□□□□ -2.22
HMG20A-211ENST00000560867 TRAV12-2A0A075B6T6 113 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 TRBV6-8A0A0A6YYG3 113 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 IFITM5A6NNB3 132 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 BBIP1A8MTZ0 92 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 ZNF736B4DX44 427 aaPredicted RBP1.15□□□□□ -2.23
HMG20A-211ENST00000560867 YPEL1O60688 119 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 EDF1O60869 148 aaKnown RBP1.15□□□□□ -2.23
HMG20A-211ENST00000560867 RBP4P02753 201 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 AKAIN1P0CW23 69 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 FGF7P21781 194 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 SCIMPQ6UWF3 145 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 CASC2Q6XLA1 102 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 IDO2Q6ZQW0 420 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 Q6ZUT4 128 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 ATP6V0E2Q8NHE4 81 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 PATE1Q8WXA2 126 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 PP6455Q8WZ26 134 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 ZFP30Q9Y2G7 519 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 ZNF518AQ6AHZ1 1483 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 BCL9LQ86UU0 1499 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 COL4A5P29400 1685 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 POLEQ07864 2286 aa1.15□□□□□ -2.23
HMG20A-211ENST00000560867 ALPK2Q86TB3 2170 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 UHRF1BP1LA0JNW5 1464 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 GEMIN2O14893 280 aaKnown RBP1.14□□□□□ -2.23
HMG20A-211ENST00000560867 CCL16O15467 120 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 HYPMO75409 117 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 HIST1H1DP16402 221 aaKnown RBP1.14□□□□□ -2.23
HMG20A-211ENST00000560867 BTG2P78543 158 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 TEX261Q6UWH6 196 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 GKN2Q86XP6 184 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 SNX29P2Q8IUI4 249 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 KCNRGQ8N5I3 272 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 C5orf17Q8NAS9 161 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 LINC00052Q96N35 136 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 SMIM7Q9BQ49 75 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 TCEAL7Q9BRU2 100 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 PSMG3Q9BT73 122 aaPredicted RBP1.14□□□□□ -2.23
HMG20A-211ENST00000560867 SNRNP25Q9BV90 132 aaKnown RBP1.14□□□□□ -2.23
HMG20A-211ENST00000560867 AGPAT4-IT1Q9H0P7 198 aa1.14□□□□□ -2.23
HMG20A-211ENST00000560867 COA4Q9NYJ1 87 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms