RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 RABAC1Q9UI14 185 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 INSIG2Q9Y5U4 225 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 AGRNO00468 2067 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IGHV4-4A0A075B6R2 117 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 IGHV4OR15-8A0A075B7B6 117 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 IGHV7-81A0A0B4J1V7 117 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 IGHV7-4-1A0A0J9YVY3 117 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 A0A1W2PPM0 123 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 LINC01619G3V211 115 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 H0Y8G0 127 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 KLK10O43240 276 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SNAI2O43623 268 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 NDUFS7O75251 213 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 CRLF1O75462 422 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ATP5LO75964 103 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SMIM17P0DL12 118 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SLC25A16P16260 332 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 EVI2AP22794 236 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 PRTN3P24158 256 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 FCER1GP30273 86 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 S100A7P31151 101 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 RAB9AP51151 201 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ZNF80P51504 273 aaPredicted RBP1.86□□□□□ -2.11
SPG11-223ENST00000560858 KRTAP10-1P60331 282 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 KLRD1Q13241 179 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 TAL2Q16559 108 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 KLF17Q5JT82 389 aaPredicted RBP1.86□□□□□ -2.11
SPG11-223ENST00000560858 MINOS1Q5TGZ0 78 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ZNF562Q6V9R5 426 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 C1orf122Q6ZSJ8 110 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 GTF2H5Q6ZYL4 71 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SMIM15Q7Z3B0 74 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ERASQ7Z444 233 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 DYNAPQ8N1N2 210 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 Q8N9W7 124 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 OR8A1Q8NGG7 326 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 Q8TAT8 98 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 FAM110DQ8TAY7 271 aaPredicted RBP1.86□□□□□ -2.11
SPG11-223ENST00000560858 ATP6V0BQ99437 205 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ASCL2Q99929 193 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 VGLL1Q99990 258 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SLC50A1Q9BRV3 221 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 CHAC1Q9BUX1 264 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SIRPDQ9H106 197 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 THYN1Q9P016 225 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SMPXQ9UHP9 88 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 LENEPQ9Y5L5 61 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 MINOS1-NBL1R4GNA1 71 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 SPENQ96T58 3664 aaKnown RBP1.86□□□□□ -2.11
SPG11-223ENST00000560858 ROS1P08922 2347 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ACACAQ13085 2346 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 ABCA2Q9BZC7 2435 aa1.86□□□□□ -2.11
SPG11-223ENST00000560858 CNOT1A5YKK6 2376 aaKnown RBP1.85□□□□□ -2.11
SPG11-223ENST00000560858 FRYQ5TBA9 3013 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TRBV7-3A0A075B6L6 115 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TRBV25-1A0A075B6N4 114 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TMSB15BA0A087X1C1 80 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 IGKV2D-26A0A0A0MRZ7 120 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TRAV12-1A0A0B4J245 112 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 A0A0G2JLM5 398 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 A0A1B0GWB2 263 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 CLPSL1A2RUU4 121 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 GAGE10A6NGK3 116 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 FABP5P3A8MUU1 101 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 G3V4G9 280 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 SMKR1H3BMG3 65 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 H3BUT2 72 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 K7EMI3 77 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 M0R381 172 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 SAP30O75446 220 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 DPM2O94777 84 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 NXPH4O95158 308 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 CNIH1O95406 144 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TNFRSF6BO95407 300 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 IGKCP01834 107 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 CTSGP08311 255 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 HLA-DMBP28068 263 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 CKS2P33552 79 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 UQCRFS1P47985 274 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 FXYD2P54710 66 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 DSCR10P59022 87 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 PRB3Q04118 309 aaPredicted RBP1.85□□□□□ -2.11
SPG11-223ENST00000560858 PRR30Q53SZ7 412 aaPredicted RBP1.85□□□□□ -2.11
SPG11-223ENST00000560858 FOXI2Q6ZQN5 318 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 VMO1Q7Z5L0 202 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 PCP2Q8IVA1 136 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 Q8N8P6 123 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 OR2K2Q8NGT1 345 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 ZNF502Q8TBZ5 544 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TMEM158Q8WZ71 300 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 MRAP2Q96G30 205 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TIMD4Q96H15 378 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 C18orf15Q96N68 181 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 AP1S3Q96PC3 154 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 VPS25Q9BRG1 176 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 SMIM2Q9BVW6 85 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 TPPP3Q9BW30 176 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 CSTL1Q9H114 145 aa1.85□□□□□ -2.11
SPG11-223ENST00000560858 ONECUT1Q9UBC0 465 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms