RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TRAV3A0A0B4J244 114 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 C12orf77C9JDV5 145 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 UBE2D1P51668 147 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 HES1Q14469 280 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 OR13A1Q8NGR1 328 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 SPANXCQ9NY87 97 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 ZNF407Q9C0G0 2248 aa5.13□□□□□ -1.59
TSPAN3-209ENST00000560715 DIDO1Q9BTC0 2240 aaKnown RBP5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 DYSFO75923 2080 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 TRAV8-1A0A0A6YYK1 113 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 IGHV3-15A0A0B4J1V0 119 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 PRSS1P07477 247 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 ORM2P19652 201 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 ZNF714Q96N38 554 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 IFI27L2Q9H2X8 130 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 PRNDQ9UKY0 176 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 TANC2Q9HCD6 1990 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 DOCK10Q96BY6 2186 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 ESPL1Q14674 2120 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 PGPA6NDG6 321 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 LINC01546A6NGU7 62 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 C15orf61A6NNL5 157 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 HERVK_113P63121 156 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 GGNQ86UU5 652 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 OR11H6Q8NGC7 330 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 FAM57AQ8TBR7 257 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 SRXN1Q9BYN0 137 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 SLC25A39Q9BZJ4 359 aaPredicted RBP5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 CALYQ9NYX4 217 aa5.12□□□□□ -1.59
TSPAN3-209ENST00000560715 OOSP1A8MZH6 123 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 SLC25A20O43772 301 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 HSPE1P61604 102 aaKnown RBP5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 TNFAIP6P98066 277 aaPredicted RBP5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 PLGLB1Q02325 96 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 C9orf153Q5TBE3 101 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 FAM104BQ5XKR9 115 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 SFTA2Q6UW10 78 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 EDA2RQ9HAV5 297 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 USF3Q68DE3 2245 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 TRAV2A0A0B4J234 112 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 TRAV8-4A0A0B4J246 113 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 A0A1W2PNU3 283 aaPredicted RBP5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 TMEM30CPA0ZSE6 113 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 COX7A2P2O60397 106 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 IGLC6P0CF74 106 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 EMP1P54849 157 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 C10orf113Q5VZT2 155 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 C11orf53Q8IXP5 236 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 C3orf22Q8N5N4 141 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 FRYLO94915 3013 aa5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 HEATR1Q9H583 2144 aaKnown RBP5.11□□□□□ -1.59
TSPAN3-209ENST00000560715 TRAV40A0A0B4J280 105 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 J3QT63 122 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 FSTL3O95633 263 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 TCRAP04437 139 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 CECR9P0C854 216 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 PROK1P58294 105 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 TMEM30BQ3MIR4 351 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 ZNRF2Q8NHG8 242 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 SRSF12Q8WXF0 261 aaKnown RBP5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 TMEM14BQ9NUH8 114 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 WDR87Q6ZQQ6 2873 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 AGRNO00468 2067 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 IGFL4Q6B9Z1 124 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 Q86TA4 180 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 Q8IYB0 196 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 C10orf126Q8N4M7 172 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 ZDBF2Q9HCK1 2354 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 PINLYPA6NC86 204 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 PROP1O75360 226 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 MRPL51Q4U2R6 128 aaKnown RBP5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 SPINK14Q6IE38 97 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 PATE2Q6UY27 113 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 AAED1Q7RTV5 226 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 LINC01600Q96MT4 127 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 MED12Q93074 2177 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 CFAP54Q96N23 3096 aa5.1□□□□□ -1.59
TSPAN3-209ENST00000560715 IGHV3OR15-7A0A075B7D8 119 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 UQCRQO14949 82 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 CD7P09564 240 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 HES3Q5TGS1 186 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 NDUFA11Q86Y39 141 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 LINC00526Q96FQ7 95 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 SPANXDQ9BXN6 97 aa5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 MRPL35Q9NZE8 188 aaKnown RBP5.09□□□□□ -1.59
TSPAN3-209ENST00000560715 IGHV4-61A0A0C4DH41 118 aa5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 SS18L1O75177 396 aaPredicted RBP5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 IGHV4-59P01825 116 aa5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 LGALS1P09382 135 aaKnown RBP5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 C2orf83Q53S99 150 aa5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 TMEM86BQ8N661 226 aa5.09□□□□□ -1.6
TSPAN3-209ENST00000560715 IGKV3D-15A0A087WSY6 115 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 TRBV6-1A0A0K0K1D8 114 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 PLNP26678 52 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 CKS2P33552 79 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 DLX1P56177 255 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 TEX36Q5VZQ5 186 aa5.08□□□□□ -1.6
TSPAN3-209ENST00000560715 NTN5Q8WTR8 489 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms