RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 GCSHP23434 173 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 SRIP30626 198 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 DPPA3Q6W0C5 159 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 NEGR1Q7Z3B1 354 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 FXYD5Q96DB9 178 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 LINC00477Q96M19 166 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 TMEM70Q9BUB7 260 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 MSRB1Q9NZV6 116 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 RGS13O14921 159 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 ORM1P02763 201 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 GPX1P07203 203 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 STAG3L2P0CL84 134 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 STAG3L3P0CL85 134 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 ARL14EPLP0DKL9 152 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 CSN1S1P47710 185 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 RAB5CP51148 216 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 CRYBA4P53673 196 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 CD300CQ08708 224 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 BTN1A1Q13410 526 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 FAM74A1Q5RGS3 127 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 C9orf62Q8N4C0 152 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
HERC1-209ENST00000560519 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 TMEM167BQ9NRX6 74 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
HERC1-209ENST00000560519 TRGV4A0A0C4DH28 118 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 J3QL48 77 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 HMGB3O15347 200 aaKnown RBP6.54□□□□□ -1.36
HERC1-209ENST00000560519 PSCAO43653 123 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 NDUFB4O95168 129 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 IGHV3-53P01767 116 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 CRISP2P16562 243 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 GCHFRP30047 84 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 KRTAP10-1P60331 282 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 RANP62826 216 aaKnown RBP6.54□□□□□ -1.36
HERC1-209ENST00000560519 TMEM78Q5T7P6 136 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 TMED6Q8WW62 240 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 OTORQ9NRC9 128 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 MRPL16Q9NX20 251 aaKnown RBP6.54□□□□□ -1.36
HERC1-209ENST00000560519 KLF12Q9Y4X4 402 aa6.54□□□□□ -1.36
HERC1-209ENST00000560519 IGLV5-52A0A0A0MRZ9 124 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 MAP1LC3B2A6NCE7 125 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 C9JCJ5 164 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 FUSP35637 526 aaKnown RBP eCLIP6.53□□□□□ -1.36
HERC1-209ENST00000560519 C9orf47Q6ZRZ4 202 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 IQCF2Q8IXL9 164 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 EXOC3-AS1Q8N2X6 119 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 CMTM2Q8TAZ6 248 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 FAM213BQ8TBF2 198 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 MAP1LC3BQ9GZQ8 125 aa6.53□□□□□ -1.36
HERC1-209ENST00000560519 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 TRBV7-9A0A0J9YWB2 115 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 TEX46H3BTG2 121 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 K7EQD1 137 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 M0R3E3 92 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC1-209ENST00000560519 RNASE4P34096 147 aaKnown RBP6.52□□□□□ -1.37
HERC1-209ENST00000560519 ZNF726P1Q15940 193 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 WFDC10BQ8IUB3 73 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 SUN5Q8TC36 379 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 C8orf49Q96NF6 230 aa6.52□□□□□ -1.37
HERC1-209ENST00000560519 NKX6-2Q9C056 277 aaPredicted RBP6.52□□□□□ -1.37
HERC1-209ENST00000560519 A0A1W2PRE2 83 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 RBAKDNA6NC62 111 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 PGPA6NDG6 321 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 SMR3BP02814 79 aaPredicted RBP6.51□□□□□ -1.37
HERC1-209ENST00000560519 PLA2G1BP04054 148 aaKnown RBP6.51□□□□□ -1.37
HERC1-209ENST00000560519 CRYGDP07320 174 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 SULT1A2P50226 295 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 PPT1P50897 306 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 NKX2-5P52952 324 aaPredicted RBP6.51□□□□□ -1.37
HERC1-209ENST00000560519 ERCC8Q13216 396 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 FHL2Q14192 279 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 SFT2D1Q8WV19 159 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 MBD3L1Q8WWY6 194 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
HERC1-209ENST00000560519 TRGV11A0A075B6L2 103 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 SERTM2A0A1B0GWG4 89 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 K7EQM0 130 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 FHITP49789 147 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 FGF8P55075 233 aaPredicted RBP6.5□□□□□ -1.37
HERC1-209ENST00000560519 C5orf17Q8NAS9 161 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 SPXQ9BT56 116 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 AGPAT4-IT1Q9H0P7 198 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 ZNF492Q9P255 531 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 TP53TG3Q9ULZ0 132 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 ARL2-SNX15V9GYD0 113 aa6.5□□□□□ -1.37
HERC1-209ENST00000560519 IGKV2-40A0A087WW87 121 aaPredicted RBP6.49□□□□□ -1.37
HERC1-209ENST00000560519 TRAV1-1A0A0B4J248 108 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 DIRC3C9JPN6 131 aa6.49□□□□□ -1.37
HERC1-209ENST00000560519 IGKV2D-40P01614 121 aaPredicted RBP6.49□□□□□ -1.37
HERC1-209ENST00000560519 GYPEP15421 78 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms