RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CSN1S1P47710 185 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 ZNF138P52744 262 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 H2BFSP57053 126 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 LRRC37A5PQ49AS3 106 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 OR10J3Q5JRS4 329 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 ATP5SQ99766 215 aa11.85□□□□□ -0.51
TSPAN3-208ENST00000560514 TIRAPP58753 221 aa11.84□□□□□ -0.51
TSPAN3-208ENST00000560514 TDRG1Q3Y452 100 aa11.84□□□□□ -0.51
TSPAN3-208ENST00000560514 FAM122CQ6P4D5 195 aa11.84□□□□□ -0.51
TSPAN3-208ENST00000560514 SPXQ9BT56 116 aa11.84□□□□□ -0.51
TSPAN3-208ENST00000560514 LENEPQ9Y5L5 61 aa11.84□□□□□ -0.51
TSPAN3-208ENST00000560514 MPC2O95563 127 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 IGHV3-33P01772 117 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 IGHV3-30-3P0DP02 117 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 DEFA1P59665 94 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 DEFA3P59666 94 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 PRR9Q5T870 116 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 ARL6IP6Q8N6S5 226 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 SCGB1C1Q8TD33 95 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 RASL10AQ92737 203 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 HSPB11Q9Y547 144 aa11.83□□□□□ -0.52
TSPAN3-208ENST00000560514 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 IGKV2-40A0A087WW87 121 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 TRAV4A0A0B4J268 109 aa11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 IGKV2D-40P01614 121 aaPredicted RBP11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 TAS2R45P59539 299 aa11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 RANP62826 216 aaKnown RBP11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 Q6ZQT7 251 aa11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 SCXQ7RTU7 201 aa11.82□□□□□ -0.52
TSPAN3-208ENST00000560514 LOC100131303A0A0U1RQF7 123 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 SSNA1O43805 119 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 OR7C2O60412 319 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 PFN1P07737 140 aaKnown RBP11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 OR10J4P0C629 311 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 RPL12P30050 165 aaKnown RBP11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 ZNF266Q14584 549 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 TMED6Q8WW62 240 aa11.81□□□□□ -0.52
TSPAN3-208ENST00000560514 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 LECT2O14960 151 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 LAGE3Q14657 143 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 TMEM183BQ1AE95 376 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 KHDC3LQ587J8 217 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 TMEM183AQ8IXX5 376 aa11.8□□□□□ -0.52
TSPAN3-208ENST00000560514 RS1O15537 224 aa11.79□□□□□ -0.52
TSPAN3-208ENST00000560514 FAM159AQ6UWV7 190 aa11.79□□□□□ -0.52
TSPAN3-208ENST00000560514 PHYHIPLQ96FC7 376 aa11.79□□□□□ -0.52
TSPAN3-208ENST00000560514 DIRC3C9JPN6 131 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 WFDC2Q14508 124 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 ACOT6Q3I5F7 207 aaPredicted RBP11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 FAM74A1Q5RGS3 127 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 Q6AWC8 147 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 CHAC1Q9BUX1 264 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
TSPAN3-208ENST00000560514 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 UBE2L3P68036 154 aaKnown RBP11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 LINC01620Q4KN68 170 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 PQLC2Q6ZP29 291 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 Q8TAT8 98 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 PRADC1Q9BSG0 188 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 FAT3Q8TDW7 4589 aa11.77□□□□□ -0.53
TSPAN3-208ENST00000560514 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
TSPAN3-208ENST00000560514 M0R2P5 195 aa11.76□□□□□ -0.53
TSPAN3-208ENST00000560514 LELP1Q5T871 98 aa11.76□□□□□ -0.53
TSPAN3-208ENST00000560514 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
TSPAN3-208ENST00000560514 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
TSPAN3-208ENST00000560514 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
TSPAN3-208ENST00000560514 PGPA6NDG6 321 aa11.75□□□□□ -0.53
TSPAN3-208ENST00000560514 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
TSPAN3-208ENST00000560514 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 TOR2AQ5JU69 321 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 SMIM3Q9BZL3 60 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 WFDC1Q9HC57 220 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 BATF3Q9NR55 127 aa11.74□□□□□ -0.53
TSPAN3-208ENST00000560514 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
TSPAN3-208ENST00000560514 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
TSPAN3-208ENST00000560514 COX11Q9Y6N1 276 aa11.73□□□□□ -0.53
TSPAN3-208ENST00000560514 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 RHOHQ15669 191 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 Q8N976 141 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 HYLS1Q96M11 299 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
TSPAN3-208ENST00000560514 SERTM2A0A1B0GWG4 89 aa11.71□□□□□ -0.53
TSPAN3-208ENST00000560514 RPL37AP61513 92 aaKnown RBP11.71□□□□□ -0.53
TSPAN3-208ENST00000560514 RMI2Q96E14 147 aa11.71□□□□□ -0.53
TSPAN3-208ENST00000560514 TRAV21A0A0B4J279 112 aa11.7□□□□□ -0.54
TSPAN3-208ENST00000560514 GGTLC3B5MD39 225 aa11.7□□□□□ -0.54
TSPAN3-208ENST00000560514 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
TSPAN3-208ENST00000560514 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms