RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SPANXN1Q5VSR9 72 aa7.34□□□□□ -1.23
RTF1-206ENST00000560447 Q8N2B8 174 aa7.34□□□□□ -1.23
RTF1-206ENST00000560447 UBE2E2Q96LR5 201 aa7.34□□□□□ -1.23
RTF1-206ENST00000560447 BBC3Q96PG8 261 aaPredicted RBP7.34□□□□□ -1.23
RTF1-206ENST00000560447 SCRT2Q9NQ03 307 aa7.34□□□□□ -1.23
RTF1-206ENST00000560447 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 KLLNB2CW77 178 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 NXPH4O95158 308 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 LEPP41159 167 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 KIR3DS1Q14943 382 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 SLC25A34Q6PIV7 304 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
RTF1-206ENST00000560447 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 LOC389332A0A1B0GUA5 103 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
RTF1-206ENST00000560447 SNRPD3P62318 126 aaKnown RBP7.32□□□□□ -1.24
RTF1-206ENST00000560447 TM4SF20Q53R12 229 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 Q5PR19 223 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 DCANP1Q8TF63 244 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 NRGNQ92686 78 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 IFI27L1Q96BM0 104 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 ZNF702PQ9H963 129 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
RTF1-206ENST00000560447 USP9XQ93008 2570 aaPredicted RBP7.31□□□□□ -1.24
RTF1-206ENST00000560447 IGLV2-18A0A075B6J9 118 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 ACACBO00763 2458 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 TCAPO15273 167 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 ATP5LO75964 103 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 UBR5O95071 2799 aaPredicted RBP7.31□□□□□ -1.24
RTF1-206ENST00000560447 PRB1P04280 392 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 S100A4P26447 101 aaKnown RBP7.31□□□□□ -1.24
RTF1-206ENST00000560447 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
RTF1-206ENST00000560447 RPL11P62913 178 aaKnown RBP7.31□□□□□ -1.24
RTF1-206ENST00000560447 GAGE1Q13065 139 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 PRR9Q5T870 116 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 GOLT1BQ9Y3E0 138 aa7.31□□□□□ -1.24
RTF1-206ENST00000560447 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 H3BVH4 76 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 K7EQG2 157 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 DLEU1O43261 78 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 NCR2O95944 276 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 COX8AP10176 69 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 G0S2P27469 103 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 PRR31Q5SQ13 230 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 NRACQ8N912 160 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 AP1S3Q96PC3 154 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 PHLDA3Q9Y5J5 127 aa7.3□□□□□ -1.24
RTF1-206ENST00000560447 ANKRD17O75179 2603 aaKnown RBP7.29□□□□□ -1.24
RTF1-206ENST00000560447 USP24Q9UPU5 2620 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 MUC21A0A0G2JKD1 596 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 MUC21A0A140T8X8 626 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 SMKR1H3BMG3 65 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 SIVA1O15304 175 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
RTF1-206ENST00000560447 HLA-DRB4P13762 266 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 EVI2AP22794 236 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 LAGE3Q14657 143 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 ORMDL2Q53FV1 153 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 MUC21Q5SSG8 566 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 C12orf54Q6X4T0 127 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 ZMAT4Q9H898 229 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 HLA-DRB4X5D2U9 266 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 FLNCQ14315 2725 aa7.29□□□□□ -1.24
RTF1-206ENST00000560447 SPTAN1Q13813 2472 aaKnown RBP7.28□□□□□ -1.24
RTF1-206ENST00000560447 A0A0J9YX75 114 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 C7orf71A4D174 169 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 A8MTW9 85 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
RTF1-206ENST00000560447 TMEM95Q3KNT9 176 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 FAM159AQ6UWV7 190 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 FOXI2Q6ZQN5 318 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 OR9G4Q8NGQ1 327 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
RTF1-206ENST00000560447 IGHV4OR15-8A0A075B7B6 117 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 A0A087WW49 117 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 hDV102S1A0JD36 115 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 A1L4Q6 167 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 HOXA3O43365 443 aaPredicted RBP7.27□□□□□ -1.25
RTF1-206ENST00000560447 Q96MF0 132 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 PEMTQ9UBM1 199 aa7.27□□□□□ -1.25
RTF1-206ENST00000560447 TRAV12-1A0A0B4J245 112 aa7.26□□□□□ -1.25
RTF1-206ENST00000560447 RNASE3P12724 160 aaKnown RBP7.26□□□□□ -1.25
RTF1-206ENST00000560447 HOXD3P31249 432 aaPredicted RBP7.26□□□□□ -1.25
RTF1-206ENST00000560447 SUMO2P61956 95 aaKnown RBP7.26□□□□□ -1.25
RTF1-206ENST00000560447 KRTAP1-3Q8IUG1 177 aa7.26□□□□□ -1.25
RTF1-206ENST00000560447 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
RTF1-206ENST00000560447 TMEM158Q8WZ71 300 aa7.26□□□□□ -1.25
RTF1-206ENST00000560447 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
RTF1-206ENST00000560447 MYO18BQ8IUG5 2567 aa7.26□□□□□ -1.25
RTF1-206ENST00000560447 F6UB75 175 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 LINC01619G3V211 115 aa7.25□□□□□ -1.25
RTF1-206ENST00000560447 H0Y8G0 127 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms