RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 SLAQ13239 276 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 TMEM183BQ1AE95 376 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 TCTE3Q8IZS6 198 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 NDFIP1Q9BT67 221 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 A0A096LPF7 62 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 F6UZH7 168 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 TYMSP04818 313 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 PFN1P07737 140 aaKnown RBP9.15□□□□□ -0.94
SMAD3-213ENST00000560175 ESRGQ1W209 222 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 SMUG1Q53HV7 270 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 DPPA3Q6W0C5 159 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 TCEAL7Q9BRU2 100 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
SMAD3-213ENST00000560175 MRPL16Q9NX20 251 aaKnown RBP9.15□□□□□ -0.94
SMAD3-213ENST00000560175 A0A0J9YY99 117 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 KANTRA0A1W2PQU2 76 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 M0R2P5 195 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 GCGP01275 180 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 CRYBA4P53673 196 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 EIF5AP63241 154 aaKnown RBP9.14□□□□□ -0.95
SMAD3-213ENST00000560175 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 STOML3Q8TAV4 291 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 PTH2Q96A98 100 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 ZNF471Q9BX82 626 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-213ENST00000560175 SDF2L1Q9HCN8 221 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
SMAD3-213ENST00000560175 IGLV2-18A0A075B6J9 118 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 TRAV34A0A0B4J273 112 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 M0R2N4 97 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 PEX7O00628 323 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 UBE2G2P60604 165 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 LGALSLQ3ZCW2 172 aaPredicted RBP9.13□□□□□ -0.95
SMAD3-213ENST00000560175 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
SMAD3-213ENST00000560175 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 TRAV4A0A0B4J268 109 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 NBDYA0A0U1RRE5 68 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 IFNA7P01567 189 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 PPT1P50897 306 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 ZNF479Q96JC4 524 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 ZFP30Q9Y2G7 519 aa9.12□□□□□ -0.95
SMAD3-213ENST00000560175 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
SMAD3-213ENST00000560175 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 FABP5P3A8MUU1 101 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 PAX4O43316 350 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 C1QBP02746 253 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 RNASE3P12724 160 aaKnown RBP9.11□□□□□ -0.95
SMAD3-213ENST00000560175 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
SMAD3-213ENST00000560175 CRIP1P50238 77 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 ZFP69Q49AA0 526 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 DNLZQ5SXM8 178 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 Q86TA4 180 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 Q9H8V8 135 aa9.11□□□□□ -0.95
SMAD3-213ENST00000560175 TRAV1-1A0A0B4J248 108 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 CIDEAO60543 219 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 PAGE4O60829 102 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 FMC1Q96HJ9 113 aa9.1□□□□□ -0.95
SMAD3-213ENST00000560175 LTAP01374 205 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 SFTA3P0C7M3 94 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 RAB5CP51148 216 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 MRPL23Q16540 153 aaKnown RBP9.09□□□□□ -0.95
SMAD3-213ENST00000560175 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
SMAD3-213ENST00000560175 TRGV4A0A0C4DH28 118 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 A0A1W2PPQ1 181 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 PRSS29PA6NIE9 313 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 RS1O15537 224 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 PFDN1O60925 122 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 BTF3P20290 206 aaKnown RBP9.08□□□□□ -0.96
SMAD3-213ENST00000560175 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 ZNF876PQ49A33 203 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 ZC2HC1AQ96GY0 325 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
SMAD3-213ENST00000560175 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
SMAD3-213ENST00000560175 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
SMAD3-213ENST00000560175 K7EQD1 137 aa9.07□□□□□ -0.96
SMAD3-213ENST00000560175 ORM1P02763 201 aa9.07□□□□□ -0.96
SMAD3-213ENST00000560175 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
SMAD3-213ENST00000560175 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms