RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 MRPL20Q9BYC9 149 aaKnown RBP3.98□□□□□ -1.77
TPM1-222ENST00000560131 RAB1BQ9H0U4 201 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 FBXL15Q9H469 300 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 MRPL35Q9NZE8 188 aaKnown RBP3.98□□□□□ -1.77
TPM1-222ENST00000560131 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 RNF7Q9UBF6 113 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 SS18L2Q9UHA2 77 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 PROCRQ9UNN8 238 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 UFC1Q9Y3C8 167 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 TIMM8BQ9Y5J9 83 aaPredicted RBP3.98□□□□□ -1.77
TPM1-222ENST00000560131 AGRNO00468 2067 aa3.98□□□□□ -1.77
TPM1-222ENST00000560131 TRAV40A0A0B4J280 105 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 RBAKDNA6NC62 111 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 I3L2K1 104 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 TFF1P04155 84 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 LGALS1P09382 135 aaKnown RBP3.97□□□□□ -1.77
TPM1-222ENST00000560131 P0DMU3 169 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 FAM231AP0DMU4 169 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 FAM231CP0DMU5 169 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 IFITM1P13164 125 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 COX6B1P14854 86 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 GLRXP35754 106 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 RPL27AP46776 148 aaKnown RBP3.97□□□□□ -1.77
TPM1-222ENST00000560131 ORMDL2Q53FV1 153 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 UTF1Q5T230 341 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 EXOC3-AS1Q8N2X6 119 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 ZNRF1Q8ND25 227 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 OR10J6PQ8NGY7 276 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 SELENOKQ9Y6D0 94 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 DSCAMO60469 2012 aa3.97□□□□□ -1.77
TPM1-222ENST00000560131 CACNA1GO43497 2377 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 TRGV5A0A0B4J1U4 118 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 SNCGO76070 127 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 NDUFA7O95182 113 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 IGKV1-17P01599 117 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 RPL35AP18077 110 aaKnown RBP3.96□□□□□ -1.78
TPM1-222ENST00000560131 HLA-DMBP28068 263 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 LYZP61626 148 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 TTC32Q5I0X7 151 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 FAM201AQ5SY85 155 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 TMEM78Q5T7P6 136 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 ATP1A1-AS1Q5TC04 95 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 PPP1R27Q86WC6 154 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 NDUFA11Q86Y39 141 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 ZNF843Q8N446 348 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 LEAP2Q969E1 77 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 DOCK7Q96N67 2140 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 RASL11BQ9BPW5 248 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 IMUPQ9GZP8 106 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 CNTRLQ7Z7A1 2325 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 CEP350Q5VT06 3117 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 PRR14LQ5THK1 2151 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 A0A0C4DFX4 3053 aa3.96□□□□□ -1.78
TPM1-222ENST00000560131 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 IGHV1-69DA0A0B4J2H0 117 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 IGHV1-18A0A0C4DH31 117 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3-64DA0A0J9YX35 117 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 M0R381 172 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 TCL1BO95988 128 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 PPP1R17O96001 155 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 CCL4P13236 92 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 RPL7P18124 248 aaKnown RBP3.95□□□□□ -1.78
TPM1-222ENST00000560131 PSMB2P49721 201 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 DEFB121Q5J5C9 76 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 ANKRD29Q8N6D5 301 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 TOMM6Q96B49 74 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 SLC50A1Q9BRV3 221 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 SPRR3Q9UBC9 169 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 SLC25A15Q9Y619 301 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 KNTC1P50748 2209 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 GON4LQ3T8J9 2241 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 HEATR1Q9H583 2144 aaKnown RBP3.95□□□□□ -1.78
TPM1-222ENST00000560131 CENPFP49454 3210 aa3.95□□□□□ -1.78
TPM1-222ENST00000560131 HTTP42858 3142 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 IGHV3OR15-7A0A075B7D8 119 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 A0A0J9YY99 117 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 SMKR1H3BMG3 65 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 SLC25A20O43772 301 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 LYZL6O75951 148 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 ATP5G1P05496 136 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 PRTN3P24158 256 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 CXCL12P48061 93 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 DLX6P56179 175 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 HERVK_113P61574 105 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 ERCC8Q13216 396 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 DIAPH2-AS1Q14236 149 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 HES1Q14469 280 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 C10orf55Q5SWW7 151 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 RUSC1-AS1Q66K80 236 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 Q6ZVQ6 151 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 Q71RC1 249 aaPredicted RBP3.94□□□□□ -1.78
TPM1-222ENST00000560131 ASCL5Q7RTU5 278 aa3.94□□□□□ -1.78
TPM1-222ENST00000560131 SLC25A29Q8N8R3 303 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms